ID Q1N384_9GAMM Unreviewed; 413 AA.
AC Q1N384;
DT 30-MAY-2006, integrated into UniProtKB/TrEMBL.
DT 30-MAY-2006, sequence version 1.
DT 24-JAN-2024, entry version 49.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=RED65_13522 {ECO:0000313|EMBL:EAT12707.1};
OS Bermanella marisrubri.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Bermanella.
OX NCBI_TaxID=207949 {ECO:0000313|EMBL:EAT12707.1, ECO:0000313|Proteomes:UP000004263};
RN [1] {ECO:0000313|EMBL:EAT12707.1, ECO:0000313|Proteomes:UP000004263}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RED65 {ECO:0000313|EMBL:EAT12707.1,
RC ECO:0000313|Proteomes:UP000004263};
RA Pinhassi J., Pedros-Alio C., Ferriera S., Johnson J., Kravitz S.,
RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R.,
RA Venter J.C.;
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
CC -!- SIMILARITY: Belongs to the glycerophosphoryl diester phosphodiesterase
CC family. {ECO:0000256|ARBA:ARBA00007277}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAT12707.1}.
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DR EMBL; AAQH01000005; EAT12707.1; -; Genomic_DNA.
DR AlphaFoldDB; Q1N384; -.
DR STRING; 207949.RED65_13522; -.
DR HOGENOM; CLU_036449_0_0_6; -.
DR Proteomes; UP000004263; Unassembled WGS sequence.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08560; GDPD_EcGlpQ_like_1; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD5-RELATED; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000004263};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 60..404
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 413 AA; 47209 MW; 469583DA737FB953 CRC64;
MIRLFPIILL LSGCTSLSIM NQQTSISVGP RPMFLIDQME DGQLKTQLRG CQNKILEHQA
FSIAHRGAPL MFPEHGFSSY QAAHTMGAGK QECDVTFTKD GELVCRHSQC DLHQTTDVLL
RPELAKQCYQ PFVPANESQP AQANCCTSDF TLKQLKQLCI KMDGYNSSAV TAEEFVKGTP
SWRTDLFQTC EQIVTHKESI KLFSEWDVDM VPELKTPQVE MPFSLNKETA FTQQRYAQKL
VNEYKEAKIN PEKVWLQSFD LKDIRYWLKN EPEFAKQAVY LDGRYVDPQF DENKPSTWQP
SMKQLKELGL HYIAPPLWVL MKEEGNEIVP SEYAIHAKQA GLKLIAWTLE RSNNMEQGGG
WYYQTIQNKV NSQGDIFVVL DVLARQVGVH AVFSDWPATT TYYANCMLNQ HSL
//