ID Q1PGI6_9TOMB Unreviewed; 345 AA.
AC Q1PGI6;
DT 16-MAY-2006, integrated into UniProtKB/TrEMBL.
DT 16-MAY-2006, sequence version 1.
DT 13-SEP-2023, entry version 27.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN Name=CP {ECO:0000313|EMBL:ABD93273.1};
OS Pelargonium flower break virus.
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus;
OC Alphacarmovirus pelargonii.
OX NCBI_TaxID=35291 {ECO:0000313|EMBL:ABD93273.1};
RN [1] {ECO:0000313|EMBL:ABD93273.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=GER2 {ECO:0000313|EMBL:ABD93273.1};
RX PubMed=16873268; DOI=10.1128/JVI.00603-06;
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT "Insights into the selective pressures restricting Pelargonium flower break
RT virus genome variability: Evidence for host adaptation.";
RL J. Virol. 80:8124-8132(2006).
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; DQ443023; ABD93273.1; -; Genomic_RNA.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR Gene3D; 2.60.40.1780; Carmovirus coat protein; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:ABD93273.1};
KW T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW Virion {ECO:0000256|ARBA:ARBA00023060}.
FT DOMAIN 54..240
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
SQ SEQUENCE 345 AA; 36809 MW; 48F95341C74A8634 CRC64;
MDAYKNDPIV RQAVAKGVAW AVKLNTRGWS SLTTQQKKAA RSALSVIQSP AVVVPRRTRV
RNPVPAGLKS GNGKAGKSST LTRSEFICNV SSTTGVTPTF QSWIINPREV KSFPQSSVCS
VGYNKYRITD FRIRFSTSCS DTMNGKVAIG FTPDSSDPVP VDKSQLYGMQ VYADTPAKES
VTLKTAADNT IRFLRDSSSD DAKLVDYGRV VLATYGFDST APSVIGELFF EYTVVYLDPT
YVVALTQHGT LTTSSGPPYA TLTTTATSTS TELNTHGKWL VVWVSADEVI NSPVISGSGA
SGSVTVVSDA QTTVVAVVTA NLPGAIISNT STAAPSSLEW YVSRL
//