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Database: UniProt
Entry: Q1PGJ8_9TOMB
LinkDB: Q1PGJ8_9TOMB
Original site: Q1PGJ8_9TOMB 
ID   Q1PGJ8_9TOMB            Unreviewed;       345 AA.
AC   Q1PGJ8;
DT   16-MAY-2006, integrated into UniProtKB/TrEMBL.
DT   16-MAY-2006, sequence version 1.
DT   13-SEP-2023, entry version 31.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN   Name=CP {ECO:0000313|EMBL:ABD93261.1};
OS   Pelargonium flower break virus.
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus;
OC   Alphacarmovirus pelargonii.
OX   NCBI_TaxID=35291 {ECO:0000313|EMBL:ABD93261.1};
RN   [1] {ECO:0000313|EMBL:ABD93261.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SP25 {ECO:0000313|EMBL:ABD93261.1};
RX   PubMed=16873268; DOI=10.1128/JVI.00603-06;
RA   Rico P., Ivars P., Elena S.F., Hernandez C.;
RT   "Insights into the selective pressures restricting Pelargonium flower break
RT   virus genome variability: Evidence for host adaptation.";
RL   J. Virol. 80:8124-8132(2006).
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; DQ443018; ABD93258.1; -; Genomic_RNA.
DR   EMBL; DQ443019; ABD93261.1; -; Genomic_RNA.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   Gene3D; 2.60.40.1780; Carmovirus coat protein; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR013669; Coat_prot_C_Carmovir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF08462; Carmo_coat_C; 1.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:ABD93261.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          74..240
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
FT   DOMAIN          253..344
FT                   /note="Coat protein C-terminal Carmoviral"
FT                   /evidence="ECO:0000259|Pfam:PF08462"
FT   REGION          58..77
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   345 AA;  36755 MW;  28B199D1674CD740 CRC64;
     MDAYKNDPIV RQAVAKGVAW AVKLNTRGWS SLTTQQKKAA RSALSVIQSP AVVVPRRTRV
     PNPVPAGLKS GNGKAGKSST LTRSEFICNV SSTTGVTPTF QSWTINPREV KSFPQSSVCS
     VGYNKYRITD FRIRFSTSCS DTMNGKVAIG FTPDSSDPVP VDKSQLYGMQ VYADTPAKES
     VTLKTAADNT IRFLRDSSSD DAKLVDYGRV VLATYGFDST APSVIGELFF EYTVVYLDPT
     YVVALTQHGT LTTSSGPPYA TLTTTATSTS MELSTHGKWL VIWVSADEVI NSPVISGSGA
     SGSVTVVSDA QTTVVAVVTA NLPGAIISNT STAAPSSLEW YVSRL
//
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