ID Q1PGJ8_9TOMB Unreviewed; 345 AA.
AC Q1PGJ8;
DT 16-MAY-2006, integrated into UniProtKB/TrEMBL.
DT 16-MAY-2006, sequence version 1.
DT 13-SEP-2023, entry version 31.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN Name=CP {ECO:0000313|EMBL:ABD93261.1};
OS Pelargonium flower break virus.
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus;
OC Alphacarmovirus pelargonii.
OX NCBI_TaxID=35291 {ECO:0000313|EMBL:ABD93261.1};
RN [1] {ECO:0000313|EMBL:ABD93261.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SP25 {ECO:0000313|EMBL:ABD93261.1};
RX PubMed=16873268; DOI=10.1128/JVI.00603-06;
RA Rico P., Ivars P., Elena S.F., Hernandez C.;
RT "Insights into the selective pressures restricting Pelargonium flower break
RT virus genome variability: Evidence for host adaptation.";
RL J. Virol. 80:8124-8132(2006).
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; DQ443018; ABD93258.1; -; Genomic_RNA.
DR EMBL; DQ443019; ABD93261.1; -; Genomic_RNA.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR Gene3D; 2.60.40.1780; Carmovirus coat protein; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR013669; Coat_prot_C_Carmovir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF08462; Carmo_coat_C; 1.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:ABD93261.1};
KW T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW Virion {ECO:0000256|ARBA:ARBA00023060}.
FT DOMAIN 74..240
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
FT DOMAIN 253..344
FT /note="Coat protein C-terminal Carmoviral"
FT /evidence="ECO:0000259|Pfam:PF08462"
FT REGION 58..77
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 345 AA; 36755 MW; 28B199D1674CD740 CRC64;
MDAYKNDPIV RQAVAKGVAW AVKLNTRGWS SLTTQQKKAA RSALSVIQSP AVVVPRRTRV
PNPVPAGLKS GNGKAGKSST LTRSEFICNV SSTTGVTPTF QSWTINPREV KSFPQSSVCS
VGYNKYRITD FRIRFSTSCS DTMNGKVAIG FTPDSSDPVP VDKSQLYGMQ VYADTPAKES
VTLKTAADNT IRFLRDSSSD DAKLVDYGRV VLATYGFDST APSVIGELFF EYTVVYLDPT
YVVALTQHGT LTTSSGPPYA TLTTTATSTS MELSTHGKWL VIWVSADEVI NSPVISGSGA
SGSVTVVSDA QTTVVAVVTA NLPGAIISNT STAAPSSLEW YVSRL
//