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Database: UniProt
Entry: Q1PGP3_9TOMB
LinkDB: Q1PGP3_9TOMB
Original site: Q1PGP3_9TOMB 
ID   Q1PGP3_9TOMB            Unreviewed;       345 AA.
AC   Q1PGP3;
DT   16-MAY-2006, integrated into UniProtKB/TrEMBL.
DT   16-MAY-2006, sequence version 1.
DT   13-SEP-2023, entry version 27.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN   Name=CP {ECO:0000313|EMBL:ABD93213.1};
OS   Pelargonium flower break virus.
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus;
OC   Alphacarmovirus pelargonii.
OX   NCBI_TaxID=35291 {ECO:0000313|EMBL:ABD93213.1};
RN   [1] {ECO:0000313|EMBL:ABD93213.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=SP1 {ECO:0000313|EMBL:ABD93213.1};
RX   PubMed=16873268; DOI=10.1128/JVI.00603-06;
RA   Rico P., Ivars P., Elena S.F., Hernandez C.;
RT   "Insights into the selective pressures restricting Pelargonium flower break
RT   virus genome variability: Evidence for host adaptation.";
RL   J. Virol. 80:8124-8132(2006).
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; DQ443003; ABD93213.1; -; Genomic_RNA.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   Gene3D; 2.60.40.1780; Carmovirus coat protein; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:ABD93213.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          54..240
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
SQ   SEQUENCE   345 AA;  36826 MW;  04D43C6831FFC826 CRC64;
     MDAYKNDPIV RQAVAKGVAW AVKLNTRGWS SLTTQQKKAA RSALSVIQSP AVVVPRRTRV
     RNPVPAGLKS GNGKAGKSST LTRSEFICNV SSTTGVTPTF QSWIINPREV KSFPQSSVCS
     VGYNKYRITD FRIRFSTSCS DTMNGKVAIG FTPDSSDPVP VDKSQLYGMQ VYADTPAKES
     VTLKTAADNT IRFLRDSSSE DAQLVDYGRV VLATYGFDST APSVIGELFF EYTVVYLDPT
     YVVALTQHGT LTTSSGPPYA TLTTTATSTS MELNTHGKWL VVWVSADEVI NSPVISGSGA
     SGSVSVVSDA QTTVVAVVTA NLPGAIISNS STAAPSSLEW YVSRL
//
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