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Database: UniProt
Entry: Q1YYB5_9GAMM
LinkDB: Q1YYB5_9GAMM
Original site: Q1YYB5_9GAMM 
ID   Q1YYB5_9GAMM            Unreviewed;       358 AA.
AC   Q1YYB5;
DT   02-MAY-2006, integrated into UniProtKB/TrEMBL.
DT   02-MAY-2006, sequence version 1.
DT   24-JAN-2024, entry version 40.
DE   RecName: Full=TRAP transporter large permease protein {ECO:0000256|RuleBase:RU369079};
GN   ORFNames=P3TCK_09048 {ECO:0000313|EMBL:EAS41291.1};
OS   Photobacterium profundum 3TCK.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Photobacterium.
OX   NCBI_TaxID=314280 {ECO:0000313|EMBL:EAS41291.1, ECO:0000313|Proteomes:UP000003789};
RN   [1] {ECO:0000313|EMBL:EAS41291.1, ECO:0000313|Proteomes:UP000003789}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=3TCK {ECO:0000313|EMBL:EAS41291.1,
RC   ECO:0000313|Proteomes:UP000003789};
RA   Bartlett D.H., Valle G., Lauro F.M., Vezzi A., Simonato F., Eloe E.,
RA   Vitulo N., Stratton T.K., D'angelo M., Ferriera S., Johnson J., Kravitz S.,
RA   Beeson K., Sutton G., Rogers Y., Friedman R., Frazier M., Venter J.C.;
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Part of the tripartite ATP-independent periplasmic (TRAP)
CC       transport system. {ECO:0000256|RuleBase:RU369079}.
CC   -!- SUBUNIT: The complex comprises the extracytoplasmic solute receptor
CC       protein and the two transmembrane proteins.
CC       {ECO:0000256|RuleBase:RU369079}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane
CC       {ECO:0000256|ARBA:ARBA00004429, ECO:0000256|RuleBase:RU369079}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004429,
CC       ECO:0000256|RuleBase:RU369079}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the TRAP transporter large permease family.
CC       {ECO:0000256|RuleBase:RU369079}.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|RuleBase:RU369079}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EAS41291.1}.
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DR   EMBL; AAPH01000037; EAS41291.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q1YYB5; -.
DR   HOGENOM; CLU_019824_4_1_6; -.
DR   Proteomes; UP000003789; Unassembled WGS sequence.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0022857; F:transmembrane transporter activity; IEA:UniProtKB-UniRule.
DR   InterPro; IPR010656; DctM.
DR   InterPro; IPR004681; TRAP_DctM.
DR   NCBIfam; TIGR00786; dctM; 1.
DR   PANTHER; PTHR33362:SF4; 2,3-DIKETO-L-GULONATE TRAP TRANSPORTER LARGE PERMEASE PROTEIN YIAN; 1.
DR   PANTHER; PTHR33362; SIALIC ACID TRAP TRANSPORTER PERMEASE PROTEIN SIAT-RELATED; 1.
DR   Pfam; PF06808; DctM; 1.
PE   3: Inferred from homology;
KW   Cell inner membrane {ECO:0000256|RuleBase:RU369079};
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU369079};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW   ECO:0000256|RuleBase:RU369079};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|RuleBase:RU369079}; Transport {ECO:0000256|RuleBase:RU369079}.
FT   TRANSMEM        67..92
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        104..125
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        146..168
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        174..193
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        205..227
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        247..264
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        292..319
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   TRANSMEM        331..354
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|RuleBase:RU369079"
FT   DOMAIN          1..348
FT                   /note="TRAP C4-dicarboxylate transport system permease DctM
FT                   subunit"
FT                   /evidence="ECO:0000259|Pfam:PF06808"
SQ   SEQUENCE   358 AA;  38653 MW;  7791F4092D15801D CRC64;
     MNYAGISRSL LAFADSLIGH KTGGLAHVNV ALSTLMGGIS GSANADAAMQ SKILAPEMTK
     RGYDLPFTAA VTAASSSISP VIPPGINLII YALLANVSVH QMFIAGYVPA FMMALSLMVT
     IAFIAKRRNY KPSRSEPASG KERFRYFAQA IPALFIPFGI ILGMRFGLFT PTEAGAIAVL
     LCSIIGFFIY RELKPYHFKY ILKETVQGTG SVMFIIIGAM VFGYYMTLEQ IPQSVASALI
     ELTDNKLVLL LLINVLLLVV GMFIEGGAAM IILTPLLLPA VLNLGVNPVH FGIIVIVNIM
     IGGVTPPFGS MMFTVCSILK VKMVDFVREV LPLLFALLTV LMILTYSESL VMFLPNLL
//
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