ID Q214J0_RHOPB Unreviewed; 289 AA.
AC Q214J0;
DT 18-APR-2006, integrated into UniProtKB/TrEMBL.
DT 18-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 98.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD88196.1};
GN OrderedLocusNames=RPC_2646 {ECO:0000313|EMBL:ABD88196.1};
OS Rhodopseudomonas palustris (strain BisB18).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=316056 {ECO:0000313|EMBL:ABD88196.1};
RN [1] {ECO:0000313|EMBL:ABD88196.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BisB18 {ECO:0000313|EMBL:ABD88196.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S.,
RA Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris BisB18.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: NodD regulates the expression of the nodABCFE genes which
CC encode other nodulation proteins. NodD is also a negative regulator of
CC its own expression. Binds flavonoids as inducers.
CC {ECO:0000256|ARBA:ARBA00003502}.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000301; ABD88196.1; -; Genomic_DNA.
DR AlphaFoldDB; Q214J0; -.
DR STRING; 316056.RPC_2646; -.
DR KEGG; rpc:RPC_2646; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_6_1_5; -.
DR OrthoDB; 8479357at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF98; HTH-TYPE TRANSCRIPTIONAL REGULATOR NMOR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 289 AA; 31539 MW; 6CF23AB436B6C81D CRC64;
MDLAALAVFR TVATEQSVTR AAELLGRVPS NVTTRIQQLE AEIGVALFQR DRRGMALTAE
GKIYLDYADR ILNLADEAQQ VVHPTAPRGV LRIGSMESTA AARLMQPLAK FNATWPDVTI
DLSTGPTRPL VEALLARRID CALVAIPDDI GWLGEGELET VSVYQEQLIL LLPPGHPEVE
QIDDIKPRSL AAFAPGCTYR MLAEQWLTGL GTRPAQIHFQ EVKSYHAMVA CTAAGSCFAI
LPRSVLDLIP DAGRFTIKPL MTVDTVLASR PGFKTPAFVE FRNMLAAFS
//
