ID Q259U0_ORYSA Unreviewed; 900 AA.
AC Q259U0;
DT 18-APR-2006, integrated into UniProtKB/TrEMBL.
DT 18-APR-2006, sequence version 1.
DT 24-JAN-2024, entry version 78.
DE SubName: Full=H0913C04.4 protein {ECO:0000313|EMBL:CAJ86163.1};
GN Name=H0913C04.4 {ECO:0000313|EMBL:CAJ86163.1};
OS Oryza sativa (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4530 {ECO:0000313|EMBL:CAJ86163.1};
RN [1] {ECO:0000313|EMBL:CAJ86163.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
RN [2] {ECO:0000313|EMBL:CAJ86163.1}
RP NUCLEOTIDE SEQUENCE.
RA Han B.;
RT "Chromosome-wide comparison between domesticated rice subspecies indica and
RT japonica.";
RL Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; AL732343; CAJ86163.1; -; Genomic_DNA.
DR AlphaFoldDB; Q259U0; -.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd00590; RRM_SF; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 13.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF1; OS04G0684500 PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 4.
DR Pfam; PF13812; PPR_3; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 13.
DR PROSITE; PS50102; RRM; 1.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT DOMAIN 119..200
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REPEAT 262..296
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 297..331
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 367..401
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 437..471
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 472..506
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 507..541
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 542..576
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 577..611
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 612..646
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 647..681
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 682..716
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 717..751
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 752..786
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..116
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 868..900
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 19..67
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 81..103
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 868..882
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 883..900
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 900 AA; 100997 MW; A78F22710E4B179C CRC64;
MQFLSLSAAA ASSPAAAVLP PKPFKPLSSA APFRRPSPPP PPPSPVPSPA PLPPPHRPSP
SPPPNPLSSK LWLSSKLSPP PPETLEQPEP STTTTTTPPP PEPEAEAEAR RQEEFRHKGK
VFVGNLPLWA RKAEIAEFFR QFGPLEKVEL VRGHDDPERN VGFCFLYYGG DDADAAAERA
VEVDGVDFRG RSLTVRLDDG RKGRARAEQR ARWVNDGRRR EPRSPWHEGR DEACREFRRV
VESRPDNWQA VVSAFERIPK PSRREFGLMI VYYAKRGDKH HARATFENMR ARGIEPNAFV
FTSLVHAYAV ARDMRGALSC VEEMKSEGLE LTIVTYSILI SGFAKINDSQ SADNLFKEAK
TKLSSLNGII YSNIIHAHCQ SGNMERAEEL VCEMEEDGID APIDVYHSMM HGYTIIQNEN
KCLVVFERLK ECGFKPSIIS YGCLLNLYVK IGKVAKALSI SKEMESCGIK HNNKTYSMLI
NGFIHLHDFA NAFAIFEEML RSGLQPDRAI YNLLIEAFCK MGNMDRAICI LEKMQKERMQ
PSNRAFRPII EGYAVAGDMK SALDTLDLMR RSGCVPTVMT YNALIHGLVR KHKVQRAVSV
LDKMSIAGIT PNEHTYTIIM RGYAASGDIG KAFEYFTKIK ESGLKLDVYI YETLLRACCK
SGRMQSALAV TREMSFQKIP RNTFIYNILI DGWARRGDVW EAEDLMKQMK EDGVPPNIHT
YTSYINACCK AGDMQRAEKV IEEMVDVGLK PNVKTYTTLI KGWARVSLPD RALKCFEEMK
LAGLKPDEAS YHCLVTSLLS RATVMEGSTY TGIISVCREM SENDLTVDLR TAVHWSRWLH
KIERTGGALT EALQRIFPPD WNSLEFLGEP SSSISMGESD DYSDSDFSGD EDEDHNIDDS
//