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Database: UniProt
Entry: Q259U0_ORYSA
LinkDB: Q259U0_ORYSA
Original site: Q259U0_ORYSA 
ID   Q259U0_ORYSA            Unreviewed;       900 AA.
AC   Q259U0;
DT   18-APR-2006, integrated into UniProtKB/TrEMBL.
DT   18-APR-2006, sequence version 1.
DT   24-JAN-2024, entry version 78.
DE   SubName: Full=H0913C04.4 protein {ECO:0000313|EMBL:CAJ86163.1};
GN   Name=H0913C04.4 {ECO:0000313|EMBL:CAJ86163.1};
OS   Oryza sativa (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4530 {ECO:0000313|EMBL:CAJ86163.1};
RN   [1] {ECO:0000313|EMBL:CAJ86163.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=12447439; DOI=10.1038/nature01183;
RA   Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA   Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA   Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA   Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA   Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA   Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA   Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA   Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA   Li J., Hong G., Xue Y., Han B.;
RT   "Sequence and analysis of rice chromosome 4.";
RL   Nature 420:316-320(2002).
RN   [2] {ECO:0000313|EMBL:CAJ86163.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Han B.;
RT   "Chromosome-wide comparison between domesticated rice subspecies indica and
RT   japonica.";
RL   Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
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DR   EMBL; AL732343; CAJ86163.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q259U0; -.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd00590; RRM_SF; 1.
DR   Gene3D; 3.30.70.330; -; 1.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 13.
DR   PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR   PANTHER; PTHR47939:SF1; OS04G0684500 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF12854; PPR_1; 2.
DR   Pfam; PF13041; PPR_2; 4.
DR   Pfam; PF13812; PPR_3; 1.
DR   Pfam; PF00076; RRM_1; 1.
DR   SMART; SM00360; RRM; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   SUPFAM; SSF48452; TPR-like; 1.
DR   PROSITE; PS51375; PPR; 13.
DR   PROSITE; PS50102; RRM; 1.
PE   3: Inferred from homology;
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   DOMAIN          119..200
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REPEAT          262..296
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          297..331
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          367..401
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          437..471
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          472..506
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          507..541
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          542..576
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          577..611
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          612..646
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          647..681
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          682..716
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          717..751
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          752..786
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          1..116
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          868..900
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        19..67
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        81..103
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        868..882
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        883..900
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   900 AA;  100997 MW;  A78F22710E4B179C CRC64;
     MQFLSLSAAA ASSPAAAVLP PKPFKPLSSA APFRRPSPPP PPPSPVPSPA PLPPPHRPSP
     SPPPNPLSSK LWLSSKLSPP PPETLEQPEP STTTTTTPPP PEPEAEAEAR RQEEFRHKGK
     VFVGNLPLWA RKAEIAEFFR QFGPLEKVEL VRGHDDPERN VGFCFLYYGG DDADAAAERA
     VEVDGVDFRG RSLTVRLDDG RKGRARAEQR ARWVNDGRRR EPRSPWHEGR DEACREFRRV
     VESRPDNWQA VVSAFERIPK PSRREFGLMI VYYAKRGDKH HARATFENMR ARGIEPNAFV
     FTSLVHAYAV ARDMRGALSC VEEMKSEGLE LTIVTYSILI SGFAKINDSQ SADNLFKEAK
     TKLSSLNGII YSNIIHAHCQ SGNMERAEEL VCEMEEDGID APIDVYHSMM HGYTIIQNEN
     KCLVVFERLK ECGFKPSIIS YGCLLNLYVK IGKVAKALSI SKEMESCGIK HNNKTYSMLI
     NGFIHLHDFA NAFAIFEEML RSGLQPDRAI YNLLIEAFCK MGNMDRAICI LEKMQKERMQ
     PSNRAFRPII EGYAVAGDMK SALDTLDLMR RSGCVPTVMT YNALIHGLVR KHKVQRAVSV
     LDKMSIAGIT PNEHTYTIIM RGYAASGDIG KAFEYFTKIK ESGLKLDVYI YETLLRACCK
     SGRMQSALAV TREMSFQKIP RNTFIYNILI DGWARRGDVW EAEDLMKQMK EDGVPPNIHT
     YTSYINACCK AGDMQRAEKV IEEMVDVGLK PNVKTYTTLI KGWARVSLPD RALKCFEEMK
     LAGLKPDEAS YHCLVTSLLS RATVMEGSTY TGIISVCREM SENDLTVDLR TAVHWSRWLH
     KIERTGGALT EALQRIFPPD WNSLEFLGEP SSSISMGESD DYSDSDFSGD EDEDHNIDDS
//
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