ID Q27R77_9HIV1 Unreviewed; 98 AA.
AC Q27R77;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Pol protein {ECO:0000313|EMBL:ABD52747.1};
DE Flags: Fragment;
GN Name=pol {ECO:0000313|EMBL:ABD52747.1};
OS Human immunodeficiency virus 1.
OC Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC Ortervirales; Retroviridae; Orthoretrovirinae; Lentivirus.
OX NCBI_TaxID=11676 {ECO:0000313|EMBL:ABD52747.1};
OH NCBI_TaxID=9606; Homo sapiens (Human).
RN [1] {ECO:0000313|EMBL:ABD52747.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=16/ST2021 {ECO:0000313|EMBL:ABD52747.1};
RX PubMed=17147506; DOI=10.1089/aid.2006.22.1172;
RA Lihana R.W., Khamadi S.A., Kiptoo M.K., Kinyua J.G., Lagat N., Magoma G.N.,
RA Mwau M.M., Makokha E.P., Onyango V., Osman S., Okoth F.A., Songok E.M.;
RT "HIV type 1 subtypes among STI patients in Nairobi: a genotypic study based
RT on partial pol gene sequencing.";
RL AIDS Res. Hum. Retroviruses 22:1172-1177(2006).
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DR EMBL; DQ387078; ABD52747.1; -; Genomic_DNA.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR41694; ENDOGENOUS RETROVIRUS GROUP K MEMBER POL PROTEIN; 1.
DR PANTHER; PTHR41694:SF3; RNA-DIRECTED DNA POLYMERASE-RELATED; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW Multifunctional enzyme {ECO:0000256|ARBA:ARBA00023268}.
FT DOMAIN 1..98
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABD52747.1"
FT NON_TER 98
FT /evidence="ECO:0000313|EMBL:ABD52747.1"
SQ SEQUENCE 98 AA; 10990 MW; 434262DCE1ABD632 CRC64;
QGTAYFLLKL AGRWPVKIVH TDNGSNFTSA AFKAACWWAN VQQEFGIPYN PQSQGVVESM
NKELKKIIGQ VREQAEHLKT AVQMAVFIHN FKRRGGLG
//
