GenomeNet

Database: UniProt
Entry: Q28N94_JANSC
LinkDB: Q28N94_JANSC
Original site: Q28N94_JANSC 
ID   Q28N94_JANSC            Unreviewed;       343 AA.
AC   Q28N94;
DT   04-APR-2006, integrated into UniProtKB/TrEMBL.
DT   04-APR-2006, sequence version 1.
DT   24-JAN-2024, entry version 103.
DE   SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:ABD55818.1};
GN   OrderedLocusNames=Jann_2901 {ECO:0000313|EMBL:ABD55818.1};
OS   Jannaschia sp. (strain CCS1).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Roseobacteraceae; Jannaschia.
OX   NCBI_TaxID=290400 {ECO:0000313|EMBL:ABD55818.1, ECO:0000313|Proteomes:UP000008326};
RN   [1] {ECO:0000313|Proteomes:UP000008326}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCS1 {ECO:0000313|Proteomes:UP000008326};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D.,
RA   Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J.,
RA   Larimer F., Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W.,
RA   Buchan A., Gonzalez J.M., Schell M.A., Richardson P.;
RT   "Complete sequence of chromosome of Jannaschia sp. CCS1.";
RL   Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ABD55818.1, ECO:0000313|Proteomes:UP000008326}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCS1 {ECO:0000313|EMBL:ABD55818.1,
RC   ECO:0000313|Proteomes:UP000008326};
RX   PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA   Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA   Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA   Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA   Saunders E., Buchan A.;
RT   "Ecological genomics of marine Roseobacters.";
RL   Appl. Environ. Microbiol. 73:4559-4569(2007).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000264; ABD55818.1; -; Genomic_DNA.
DR   RefSeq; WP_011456022.1; NC_007802.1.
DR   AlphaFoldDB; Q28N94; -.
DR   STRING; 290400.Jann_2901; -.
DR   KEGG; jan:Jann_2901; -.
DR   eggNOG; COG1609; Bacteria.
DR   HOGENOM; CLU_037628_6_1_5; -.
DR   OMA; VAAHDDH; -.
DR   OrthoDB; 9805705at2; -.
DR   Proteomes; UP000008326; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd01392; HTH_LacI; 1.
DR   CDD; cd06267; PBP1_LacI_sugar_binding-like; 1.
DR   Gene3D; 3.40.50.2300; -; 2.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR000843; HTH_LacI.
DR   InterPro; IPR046335; LacI/GalR-like_sensor.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR028082; Peripla_BP_I.
DR   PANTHER; PTHR30146:SF121; HTH-TYPE TRANSCRIPTIONAL REGULATOR EBGR-RELATED; 1.
DR   PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR   Pfam; PF00356; LacI; 1.
DR   Pfam; PF13377; Peripla_BP_3; 1.
DR   SMART; SM00354; HTH_LACI; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
DR   PROSITE; PS50932; HTH_LACI_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000008326};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          7..61
FT                   /note="HTH lacI-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50932"
FT   DOMAIN          9..51
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   343 AA;  37823 MW;  03109167E2014CDA CRC64;
     MADQQIRNME DFAAVSGISR PTVSKYFNDP QSVRATTRAR IEQALDRYDY RPNIYAVNQN
     RRLTKNVGIM VPYLADPFFA EIARNIEMMV IEAGFRPILL SSHGSPEQEA ENMESLRVLK
     PAGVLMAPLG RASDRSAVEK FCRDVPTILF DSNLDGMGEA FIGSDNVSFV EQTVAYISQS
     GSPPCFFEMK NPANPNANKR RNAYIAAMET RGLEPRVISI DGDGWAFEEI GRIGAHDVLQ
     AGQLPTNTVI CSNDRLAIGF LAACYERGLR VGSGPDCALR VASHDDHPFS RFTCPALTTA
     AHDYDSVSKS SVDTLFQLIE NGARLPQRHE TLFPAKLIIR ASA
//
DBGET integrated database retrieval system