ID Q2A113_ALESE Unreviewed; 619 AA.
AC Q2A113;
DT 04-APR-2006, integrated into UniProtKB/TrEMBL.
DT 04-APR-2006, sequence version 1.
DT 27-MAR-2024, entry version 61.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:CAJ80881.1};
DE Flags: Fragment;
GN Name=phya {ECO:0000313|EMBL:CAJ80881.1};
OS Alectra sessiliflora (Gerardia sessiliflora).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Orobanchaceae; Orobanchaceae incertae sedis;
OC Alectra.
OX NCBI_TaxID=46040 {ECO:0000313|EMBL:CAJ80881.1};
RN [1] {ECO:0000313|EMBL:CAJ80881.1}
RP NUCLEOTIDE SEQUENCE.
RX AGRICOLA=IND43820103;
RA Bennett J.R., Mathews S.;
RT "Phylogeny of the parasitic plant family Orobanchaceae inferred from
RT phytochrome A.";
RL Am. J. Bot. 93:1039-1051(2006).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; AM233924; CAJ80881.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2A113; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 56..233
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 465..535
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAJ80881.1"
FT NON_TER 619
FT /evidence="ECO:0000313|EMBL:CAJ80881.1"
SQ SEQUENCE 619 AA; 68878 MW; 171B2EF3DB36FAA3 CRC64;
SGKPFYAIIH RVTGSLVIDF EPVKPHEVPM TAAGALQSYK LAAKAIARLQ ATPSGSLERL
CETMAQEVFE LTGYDRVMVY KFHDDDHGEV FTEITKPGLE PYAGLHYPAT DIPQAARFLF
MKNKVRMICD CRSAHVKVVQ DEGLFSDLTL CGSTLRAPHS CHLRYMENMN SIASLVMAVV
VNEGNDEESS ASSSSTSSHP EKKKRLWGLV VCHHTSPRFV PFPLRYACEF LSQVFSIHVS
KELELLNQTQ EKNILKTQTM LCDMLLRGNP LAIVTQSPTV MDLVKCDGAV LLYKGKTHRL
GLAPSDLQIR DIMSWLDEYH RDSTGTSTDS LLDAGFPGAA ALGDAFCGMA AIRITGRDWL
FWFRSHTAAE VRWGGAKHEK GDEDDGRRMH PRSSFNAFLE VVKARSVPWR DFEMDAIHSL
QLILRNACEK EMEEEERRKD MVVAGEIQAR LTELHIDGAR EMEAVTSEMV RLIETASVPI
LAVGVDGLVN GWNTKIADLT GLLVDEAIGQ PFLALVEEAS VDAVSRMLER ALQGHEERNV
QFEIKTHGPR AESGPISLVV NACASRDVRE NVVGVCFIAQ DVTTERSMMD KFTRIEGDYR
AIVQNPNPLI PPIFGSDEF
//
