ID Q2G3J6_NOVAD Unreviewed; 267 AA.
AC Q2G3J6;
DT 21-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 21-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 100.
DE SubName: Full=Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ABD27577.1};
GN OrderedLocusNames=Saro_3142 {ECO:0000313|EMBL:ABD27577.1};
OS Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG
OS 56034 / CIP 105152 / NBRC 16084 / F199).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=279238 {ECO:0000313|EMBL:ABD27577.1, ECO:0000313|Proteomes:UP000009134};
RN [1] {ECO:0000313|Proteomes:UP000009134}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084
RC / F199 {ECO:0000313|Proteomes:UP000009134};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M.,
RA Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N.,
RA Fredrickson J., Balkwill D., Romine M.F., Richardson P.;
RT "Complete sequence of Novosphingobium aromaticivorans DSM 12444.";
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|RuleBase:RU000408}.
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DR EMBL; CP000248; ABD27577.1; -; Genomic_DNA.
DR AlphaFoldDB; Q2G3J6; -.
DR STRING; 279238.Saro_3142; -.
DR KEGG; nar:Saro_3142; -.
DR eggNOG; COG1278; Bacteria.
DR HOGENOM; CLU_1000973_0_0_5; -.
DR Proteomes; UP000009134; Chromosome.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 2.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF60; LD37574P; 1.
DR Pfam; PF00313; CSD; 2.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 2.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 2.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:ABD27577.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000009134}.
FT DOMAIN 111..176
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 198..264
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..105
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..21
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 267 AA; 27012 MW; A050E068832F2576 CRC64;
MGFDRGRRGR GRDKRDGFGD EGGFDPYGGG GFGGGGYDRG GFGGGDRGGF GGGGRGGFGG
GDRGGFGGGD RGGFGGGDRG GFGGGGGGRG GFGGPRGGGG GGGMPAQVVG TGKGVVKFFN
GQKGFGFIQR EDGGEDVFVH ISAVERAGLE GLAEGQQLEF NLVDRGGKIS AADLQVVGDV
IPVAAKPASP QRELTGEKAS GTVKFFNAMK GFGFITRDDG QPDAFVHISA VERSGLRELN
EGDKLEFDLE VDRRGKYSAV NLVPRQD
//
