ID Q2JIE1_SYNJB Unreviewed; 420 AA.
AC Q2JIE1;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE SubName: Full=ISSoc12, transposase {ECO:0000313|EMBL:ABD03621.1};
GN OrderedLocusNames=CYB_2696 {ECO:0000313|EMBL:ABD03621.1};
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321332 {ECO:0000313|EMBL:ABD03621.1, ECO:0000313|Proteomes:UP000001938};
RN [1] {ECO:0000313|EMBL:ABD03621.1, ECO:0000313|Proteomes:UP000001938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13) {ECO:0000313|Proteomes:UP000001938};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
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DR EMBL; CP000240; ABD03621.1; -; Genomic_DNA.
DR RefSeq; WP_011434239.1; NC_007776.1.
DR AlphaFoldDB; Q2JIE1; -.
DR STRING; 321332.CYB_2696; -.
DR KEGG; cyb:CYB_2696; -.
DR eggNOG; COG0675; Bacteria.
DR HOGENOM; CLU_032903_0_1_3; -.
DR OrthoDB; 551605at2; -.
DR Proteomes; UP000001938; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR021027; Transposase_put_HTH.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF12323; HTH_OrfB_IS605; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000001938};
KW Transposition {ECO:0000256|ARBA:ARBA00022578};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 2..43
FT /note="Transposase putative helix-turn-helix"
FT /evidence="ECO:0000259|Pfam:PF12323"
FT DOMAIN 188..292
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 305..371
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
SQ SEQUENCE 420 AA; 48375 MW; 0BD732CBA042F087 CRC64;
MNYTYRIYPD AAQQAKLRSW LETCRGVYNY ALRELKDWIA SRKCPIDRCS LEKEYIIPAD
EPFPSYHRQQ NNLPKAKKQF PHLAKVHSQV LQATIRRLHD TWEAFQKRGY GFPRFKKQGQ
FKSFVFPQFK DNPISGSSIK LPKIGKVPIN LHRPIPDGFK VKQVRVLSKV RGTQWYVVVT
IESDISVPDA PVHGRAIGID LGLERFLTVS DGSFQERPKF FRSMQRKLKL LQRRAARKQK
GSRNWEKAQI KVARMHHRIA NRRKDFHLKT AHKLCDQAQT IFAEDLNVTG LTRGMLRKGC
VDAAFGQFLS LLEWVCWKRG VYFAKVNSNG TSQTCPKCFA TVSKTLTARE HHCPECGYRT
HRDHAAAEMV LHRGLENVVA QGLWGTETAC QVVLSGVYDL DKWRGAGMPN REVRKPALYP
//
