ID Q2JK84_SYNJB Unreviewed; 270 AA.
AC Q2JK84;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 85.
DE SubName: Full=RNA methyltransferase, TrmH family {ECO:0000313|EMBL:ABD02911.1};
GN OrderedLocusNames=CYB_1962 {ECO:0000313|EMBL:ABD02911.1};
OS Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium
OS Yellowstone B-Prime).
OC Bacteria; Cyanobacteriota; Cyanophyceae; Synechococcales; Synechococcaceae;
OC Synechococcus.
OX NCBI_TaxID=321332 {ECO:0000313|EMBL:ABD02911.1, ECO:0000313|Proteomes:UP000001938};
RN [1] {ECO:0000313|EMBL:ABD02911.1, ECO:0000313|Proteomes:UP000001938}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JA-2-3B'a(2-13) {ECO:0000313|Proteomes:UP000001938};
RX PubMed=18059494; DOI=10.1038/ismej.2007.46;
RA Bhaya D., Grossman A.R., Steunou A.S., Khuri N., Cohan F.M., Hamamura N.,
RA Melendrez M.C., Bateson M.M., Ward D.M., Heidelberg J.F.;
RT "Population level functional diversity in a microbial community revealed by
RT comparative genomic and metagenomic analyses.";
RL ISME J. 1:703-713(2007).
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DR EMBL; CP000240; ABD02911.1; -; Genomic_DNA.
DR RefSeq; WP_011433550.1; NC_007776.1.
DR AlphaFoldDB; Q2JK84; -.
DR STRING; 321332.CYB_1962; -.
DR KEGG; cyb:CYB_1962; -.
DR eggNOG; COG0566; Bacteria.
DR HOGENOM; CLU_021322_3_2_3; -.
DR OrthoDB; 9794400at2; -.
DR Proteomes; UP000001938; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0006396; P:RNA processing; IEA:InterPro.
DR CDD; cd18095; SpoU-like_rRNA-MTase; 1.
DR Gene3D; 3.30.1330.30; -; 1.
DR Gene3D; 3.40.1280.10; -; 1.
DR InterPro; IPR029028; Alpha/beta_knot_MTases.
DR InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR InterPro; IPR001537; SpoU_MeTrfase.
DR InterPro; IPR013123; SpoU_subst-bd.
DR InterPro; IPR029026; tRNA_m1G_MTases_N.
DR PANTHER; PTHR43191; RRNA METHYLTRANSFERASE 3; 1.
DR PANTHER; PTHR43191:SF2; RRNA METHYLTRANSFERASE 3, MITOCHONDRIAL; 1.
DR Pfam; PF00588; SpoU_methylase; 1.
DR Pfam; PF08032; SpoU_sub_bind; 1.
DR SMART; SM00967; SpoU_sub_bind; 1.
DR SUPFAM; SSF75217; alpha/beta knot; 1.
DR SUPFAM; SSF55315; L30e-like; 1.
PE 4: Predicted;
KW Methyltransferase {ECO:0000313|EMBL:ABD02911.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001938};
KW Transferase {ECO:0000313|EMBL:ABD02911.1}.
FT DOMAIN 33..106
FT /note="RNA 2-O ribose methyltransferase substrate binding"
FT /evidence="ECO:0000259|SMART:SM00967"
SQ SEQUENCE 270 AA; 29355 MW; E2BF80C0385BA64F CRC64;
MASELLTSPK NPWIRKLRQL HRSKGRREQG AFLVEGSHLI EEALRVGWPL QALCYTPDWA
SRHPHLLADL PKGLRRQPVS SEVMAALCTT ESPEGAVAVA VSWQISSPPL SKLRLGLVVE
TLQDPGNLGS LIRVVAAAGA DGLWLSADSV DPENPKVLRA SAGQWFRRPP QVVPDLAAWI
QSCRCHGIQV LAATLSPTAN CYWDQDLTRP TLFLLGNEGA GLREATIQQA DAQVRIPMAE
GVESLNVAMT GGLLLYEALR QRRSRSGSAP
//
