ID Q2L2S5_BORA1 Unreviewed; 570 AA.
AC Q2L2S5;
DT 07-MAR-2006, integrated into UniProtKB/TrEMBL.
DT 07-MAR-2006, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE RecName: Full=Small ribosomal subunit protein bS1 {ECO:0000256|ARBA:ARBA00035293};
DE AltName: Full=30S ribosomal protein S1 {ECO:0000256|ARBA:ARBA00035517};
GN Name=rpsA {ECO:0000313|EMBL:CAJ48963.1};
GN Synonyms=ssyF {ECO:0000313|EMBL:CAJ48963.1};
GN OrderedLocusNames=BAV1354 {ECO:0000313|EMBL:CAJ48963.1};
OS Bordetella avium (strain 197N).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Alcaligenaceae; Bordetella.
OX NCBI_TaxID=360910 {ECO:0000313|EMBL:CAJ48963.1, ECO:0000313|Proteomes:UP000001977};
RN [1] {ECO:0000313|EMBL:CAJ48963.1, ECO:0000313|Proteomes:UP000001977}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=197N {ECO:0000313|EMBL:CAJ48963.1,
RC ECO:0000313|Proteomes:UP000001977};
RX PubMed=16885469; DOI=10.1128/JB.01927-05;
RA Sebaihia M., Preston A., Maskell D.J., Kuzmiak H., Connell T.D., King N.D.,
RA Orndorff P.E., Miyamoto D.M., Thomson N.R., Harris D., Goble A., Lord A.,
RA Murphy L., Quail M.A., Rutter S., Squares R., Squares S., Woodward J.,
RA Parkhill J., Temple L.M.;
RT "Comparison of the genome sequence of the poultry pathogen Bordetella avium
RT with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals
RT extensive diversity in surface structures associated with host
RT interaction.";
RL J. Bacteriol. 188:6002-6015(2006).
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767}.
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DR EMBL; AM167904; CAJ48963.1; -; Genomic_DNA.
DR RefSeq; WP_012417035.1; NC_010645.1.
DR AlphaFoldDB; Q2L2S5; -.
DR STRING; 360910.BAV1354; -.
DR GeneID; 41393238; -.
DR KEGG; bav:BAV1354; -.
DR eggNOG; COG0539; Bacteria.
DR HOGENOM; CLU_015805_2_1_4; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000001977; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05689; S1_RPS1_repeat_ec4; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000001977};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000313|EMBL:CAJ48963.1};
KW Ribosomal protein {ECO:0000313|EMBL:CAJ48963.1}.
FT DOMAIN 30..96
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 114..180
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 201..269
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 286..356
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 373..443
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 460..529
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 570 AA; 62419 MW; 39EA5F48DCB8C6F8 CRC64;
MSSVSTSAFG GENFADLFAE SLKSQDMKSG EVISAEVVRV DHNFVVVNAG LKSEALIPLE
EFLNDQGELE VQPGDFVSVA IDSLENGYGD TILSRDRAKR LSAWLQLEKA LENGELVTGT
ITGKVKGGLT VMTNGIRAFL PGSLVDLRPV KDTTPYEGKT LEFKVIKLDR KRNNVVLSRR
QVLEASMGEE RQKLLETLHE GAVVKGVVKN ITDYGAFVDL GGIDGLLHIT DMAWRRVRHP
SEVLQVGQEV EAKVLKFDQE KSRVSLGVKQ LGEDPWVGLA RRYPQGTRLF GKVTNLTDYG
AFVEVEAGIE GLVHVSEMDW TNKNVDPRKV VTLGEEVEVM VLEIDEDRRR ISLGMKQCRQ
NPWEEFATNF KRGDKVRGAI KSITDFGVFV GLPGGIDGLV HLSDLSWTET GEEAVRNFKK
GDEIEAVVLG IDTEKERISL GIKQLEGDPF NNFVATYDKG AVVPGTIKQV EAKGAVVTLS
VDVEGYLRAS EISSGRVEDA TTVLNVGDNV EAMIINIDRK ARSIQLSIKA RDNAETAETI
QRMSEASASS GTTNLGALLK AKLDQQRNDG
//
