ID   Q2V852_TCV              Unreviewed;       350 AA.
AC   Q2V852;
DT   10-JAN-2006, integrated into UniProtKB/TrEMBL.
DT   10-JAN-2006, sequence version 1.
DT   13-SEP-2023, entry version 29.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
DE   Flags: Fragment;
GN   Name=CP {ECO:0000313|EMBL:ABB89503.1};
OS   Turnip crinkle virus (TCV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Betacarmovirus;
OC   Betacarmovirus brassicae.
OX   NCBI_TaxID=11988 {ECO:0000313|EMBL:ABB89503.1};
OH   NCBI_TaxID=3709; Brassica napus subsp. rapifera.
OH   NCBI_TaxID=5130; Hypomyces.
OH   NCBI_TaxID=180540; Moricandia arvensis (Purple mistress) (Brassica arvensis).
RN   [1] {ECO:0000313|EMBL:ABB89503.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=RS2_4_5 {ECO:0000313|EMBL:ABB89503.1};
RA   Li Y.H., Pallett D.W., Naylor M., Wang H.;
RT   "Low titer chronic infections maintain polymorphisms in the coat protein of
RT   Turnip crinkle virus.";
RL   Submitted (NOV-2005) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; DQ286876; ABB89503.1; -; Genomic_RNA.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   Gene3D; 2.60.40.3420; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:ABB89503.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          60..240
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
FT   NON_TER         350
FT                   /evidence="ECO:0000313|EMBL:ABB89503.1"
SQ   SEQUENCE   350 AA;  38070 MW;  E3C423C142601EA4 CRC64;
     MENDPRVRKF ASEGAQWAIK WQKKGWSSLT SRQKQTARAA MGIKLSPVAQ PVQKVTRLSA
     PVALAYREVS TQPRVSTARD GITRSGSELI TTLKKNTDTE PKYTTAVLNP SEPGTFNQLI
     KEAAQYEKYR FTSLRFRYSP MSPSTTGGKV ALAFDRDAAK PPPNDLASLY NIEGCVSSVP
     WTGFILTVPT DSTDRFVADG ISDPKLVDFG KLIMATYGQG ANDAAQLGEV RVEYTVQLKN
     RTGSTSDAQI GDFAGVKDGP RLVSWSKTKG TAGWEHDCHF LGTGNFSLTL FYEKAPVSGL
     ENADASDFSV LGEAAAGSVQ WAGVKVAERG QSVKMVTTEE QPRGKWQALR
//