ID RS4_DESDG Reviewed; 208 AA.
AC Q30Z67;
DT 21-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 06-DEC-2005, sequence version 1.
DT 01-MAY-2013, entry version 49.
DE RecName: Full=30S ribosomal protein S4;
GN Name=rpsD; OrderedLocusNames=Dde_2232;
OS Desulfovibrio desulfuricans (strain G20).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;
OC Desulfovibrionaceae; Desulfovibrio.
OX NCBI_TaxID=207559;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=G20;
RX PubMed=21685289; DOI=10.1128/JB.05400-11;
RA Hauser L.J., Land M.L., Brown S.D., Larimer F., Keller K.L.,
RA Rapp-Giles B.J., Price M.N., Lin M., Bruce D.C., Detter J.C.,
RA Tapia R., Han C.S., Goodwin L.A., Cheng J.F., Pitluck S., Copeland A.,
RA Lucas S., Nolan M., Lapidus A.L., Palumbo A.V., Wall J.D.;
RT "Complete genome sequence and updated annotation of Desulfovibrio
RT alaskensis G20.";
RL J. Bacteriol. 193:4268-4269(2011).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC directly to 16S rRNA where it nucleates assembly of the body of
CC the 30S subunit (By similarity).
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy (By similarity).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5.
CC The interaction surface between S4 and S5 is involved in control
CC of translational fidelity (By similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein S4P family.
CC -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
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DR EMBL; CP000112; ABB39029.1; -; Genomic_DNA.
DR RefSeq; YP_388724.1; NC_007519.1.
DR ProteinModelPortal; Q30Z67; -.
DR SMR; Q30Z67; 3-208.
DR STRING; 207559.Dde_2232; -.
DR EnsemblBacteria; ABB39029; ABB39029; Dde_2232.
DR GeneID; 3757243; -.
DR KEGG; dde:Dde_2232; -.
DR PATRIC; 21743397; VBIDesDes50040_2206.
DR eggNOG; COG0522; -.
DR HOGENOM; HOG000221003; -.
DR KO; K02986; -.
DR OMA; THGHILV; -.
DR ProtClustDB; PRK05327; -.
DR BioCyc; DALA207559:GH1L-1999-MONOMER; -.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 1.10.1050.10; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1; -.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1 208 30S ribosomal protein S4.
FT /FTId=PRO_0000228894.
FT DOMAIN 98 161 S4 RNA-binding.
SQ SEQUENCE 208 AA; 23972 MW; 57428451D3F4BAD4 CRC64;
MAKYNDSKCR ICRREGGKLF LKGDRCYTDK CAFDRRPYAP GQHGRARKKN SDYAVQLREK
QKVRRMYGLL EKQFHSYFVK ADMSKGVTGS NLLSILERRL DNVIYRLGFA NSRSQARQMV
RHGIFTVNGR KATIPSIQVK VGDVIEVREK NRKMPVIAEA QEVIARRGCP SWLEADGPNF
RGVVKALPQR EDIQFPMSEQ LIVELYSK
//
