ID Q3S4C1_POLNA Unreviewed; 334 AA.
AC Q3S4C1;
DT 11-OCT-2005, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2005, sequence version 1.
DT 27-MAR-2024, entry version 94.
DE SubName: Full=Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:AAZ93397.1};
DE EC=1.13.11.4 {ECO:0000313|EMBL:ABM37780.1};
GN Name=nagI {ECO:0000313|EMBL:AAZ93397.1};
GN OrderedLocusNames=Pnap_2476 {ECO:0000313|EMBL:ABM37780.1};
OS Polaromonas naphthalenivorans (strain CJ2).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas.
OX NCBI_TaxID=365044 {ECO:0000313|EMBL:AAZ93397.1};
RN [1] {ECO:0000313|EMBL:AAZ93397.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CJ2 {ECO:0000313|EMBL:AAZ93397.1};
RX PubMed=16461653; DOI=10.1128/AEM.72.2.1086-1095.2006;
RA Jeon C.O., Park M., Ro H.-S., Park W., Madsen E.L.;
RT "The naphthalene catabolic (nag) genes of Polaromonas naphthalenivorans
RT CJ2: evolutionary implications for two gene clusters and novel regulatory
RT control.";
RL Appl. Environ. Microbiol. 72:1086-1095(2006).
RN [2] {ECO:0000313|EMBL:ABM37780.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CJ2 {ECO:0000313|EMBL:ABM37780.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Sims D.R., Brettin T., Bruce D., Han C., Tapia R., Brainard J., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Madsen E.L.,
RA Richardson P.;
RT "Complete sequence of Chromosome1 of Polaromonas naphthalenivorans CJ2.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000000644}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CJ2 {ECO:0000313|Proteomes:UP000000644};
RX PubMed=19453698; DOI=10.1111/j.1462-2920.2009.01947.x;
RA Yagi J.M., Sims D., Brettin T., Bruce D., Madsen E.L.;
RT "The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal
RT tar-contaminated sediment, reveals physiological and metabolic versatility
RT and evolution through extensive horizontal gene transfer.";
RL Environ. Microbiol. 11:2253-2270(2009).
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DR EMBL; DQ167474; AAZ93397.1; -; Genomic_DNA.
DR EMBL; CP000529; ABM37780.1; -; Genomic_DNA.
DR RefSeq; WP_011801858.1; NC_008781.1.
DR AlphaFoldDB; Q3S4C1; -.
DR STRING; 365044.Pnap_2476; -.
DR KEGG; pna:Pnap_2476; -.
DR eggNOG; COG3435; Bacteria.
DR HOGENOM; CLU_060572_0_0_4; -.
DR OrthoDB; 285029at2; -.
DR Proteomes; UP000000644; Chromosome.
DR GO; GO:0047922; F:gentisate 1,2-dioxygenase activity; IEA:UniProtKB-EC.
DR CDD; cd02216; cupin_GDO-like_N; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR047183; GDO-like.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR41517; 1,2-DIOXYGENASE PROTEIN-RELATED; 1.
DR PANTHER; PTHR41517:SF1; 1,2-DIOXYGENASE PROTEIN-RELATED; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
PE 4: Predicted;
KW Dioxygenase {ECO:0000313|EMBL:AAZ93397.1};
KW Oxidoreductase {ECO:0000313|EMBL:ABM37780.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000644}.
FT DOMAIN 85..151
FT /note="Cupin type-2"
FT /evidence="ECO:0000259|Pfam:PF07883"
SQ SEQUENCE 334 AA; 37263 MW; 978470DFD712E9EE CRC64;
MLDKKERDTM VPLWPSLRAV LPPKVPTRQT RPTSWSYQTL KPLLLQAGEL TPIEKAERRV
LVLANPGHGL EKMQASAAMY LGMLLLLPGE WAPSHRHTPN AVRMIVEGEG AYTTVDGEKC
PMSRGDLILT PTGLWHEHGH DGTEPVVWLD VLDLPLLYYM EASYHLNGKR QAVKPGRGDR
AWTRAGVVPT PVFQRSDKRY PMLRYPWVDT RAALLSLASD QPYLECVQVT YVNPETGEDA
ENILGFYALM LKPGQSLRLP TRSPAQVFHQ IEGRAQITVD GVGQTFTLAE ADTCCAPGYT
EVTLKNLSAD QPAFLFLADE SPLHRKLGVY EVRA
//
