ID Q3SQY6_NITWN Unreviewed; 326 AA.
AC Q3SQY6;
DT 11-OCT-2005, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2005, sequence version 1.
DT 27-MAR-2024, entry version 103.
DE SubName: Full=Helix-turn-helix, Fis-type {ECO:0000313|EMBL:ABA05305.1};
DE EC=2.7.7.49 {ECO:0000313|EMBL:ABA05305.1};
GN OrderedLocusNames=Nwi_1492 {ECO:0000313|EMBL:ABA04753.1}, Nwi_2047
GN {ECO:0000313|EMBL:ABA05305.1}, Nwi_2358 {ECO:0000313|EMBL:ABA05612.1},
GN Nwi_2674 {ECO:0000313|EMBL:ABA05927.1};
OS Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 /
OS NCIMB 11846 / Nb-255).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Nitrobacter.
OX NCBI_TaxID=323098 {ECO:0000313|EMBL:ABA05305.1, ECO:0000313|Proteomes:UP000002531};
RN [1] {ECO:0000313|EMBL:ABA05305.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Nb-255;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T.,
RA Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M.,
RA Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyripides N.,
RA Lykidis A., Richardson P.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABA05305.1, ECO:0000313|Proteomes:UP000002531}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255
RC {ECO:0000313|Proteomes:UP000002531}, and Nb-255
RC {ECO:0000313|EMBL:ABA05305.1};
RX PubMed=16517654; DOI=10.1128/AEM.72.3.2050-2063.2006;
RA Starkenburg S.R., Chain P.S., Sayavedra-Soto L.A., Hauser L., Land M.L.,
RA Larimer F.W., Malfatti S.A., Klotz M.G., Bottomley P.J., Arp D.J.,
RA Hickey W.J.;
RT "Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium
RT Nitrobacter winogradskyi Nb-255.";
RL Appl. Environ. Microbiol. 72:2050-2063(2006).
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DR EMBL; CP000115; ABA04753.1; -; Genomic_DNA.
DR EMBL; CP000115; ABA05305.1; -; Genomic_DNA.
DR EMBL; CP000115; ABA05612.1; -; Genomic_DNA.
DR EMBL; CP000115; ABA05927.1; -; Genomic_DNA.
DR AlphaFoldDB; Q3SQY6; -.
DR KEGG; nwi:Nwi_1492; -.
DR KEGG; nwi:Nwi_2047; -.
DR KEGG; nwi:Nwi_2358; -.
DR KEGG; nwi:Nwi_2674; -.
DR eggNOG; COG2801; Bacteria.
DR eggNOG; COG2963; Bacteria.
DR HOGENOM; CLU_027402_10_0_5; -.
DR Proteomes; UP000002531; Chromosome.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR048020; Transpos_IS3.
DR InterPro; IPR010921; Trp_repressor/repl_initiator.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033516; transpos_IS3; 1.
DR PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR PANTHER; PTHR46889:SF1; TRANSPOSASE INSO FOR INSERTION SEQUENCE ELEMENT IS911B-RELATED; 1.
DR Pfam; PF13565; HTH_32; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF48295; TrpR-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000313|EMBL:ABA05305.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000002531};
KW Transferase {ECO:0000313|EMBL:ABA05305.1}.
FT DOMAIN 132..299
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 326 AA; 37772 MW; A5ED20ECF4BAC3F3 CRC64;
MRYPASEKAE IIRLVEASHL PARRTLDKLG IPRATFYRWY DRYLTGGIEA LADHRSRPDR
VWNRIPDPIR AEIVELALRE TELSPRELAV RFTDEKRYFV SEASVYRLLK AHDLITSPAY
IVIKAASEFK DKTTAPNQLW QTDFTYLKIT GWGWYYLSTV LDDFSRFIVA WKLCATMRAD
DVTATLDLAL AASGLDQIAV AHRPRLLSDN GASYISAELA TWLDGKGMKH VRGAPYHPQT
QGKIERWHQT LKNRILLENY YLPGDLERQV AAFVEHYNHG RYHESIDNLT PADVYFGRGQ
TILTERERIK RQTIHQRRLQ HHLQAA
//
