GenomeNet

Database: UniProt
Entry: Q4DGN8_TRYCC
LinkDB: Q4DGN8_TRYCC
Original site: Q4DGN8_TRYCC 
ID   Q4DGN8_TRYCC            Unreviewed;       450 AA.
AC   Q4DGN8;
DT   13-SEP-2005, integrated into UniProtKB/TrEMBL.
DT   13-SEP-2005, sequence version 1.
DT   24-JAN-2024, entry version 87.
DE   SubName: Full=Heterogeneous nuclear ribonucleoprotein H/F, putative {ECO:0000313|EMBL:EAN91678.1};
GN   ORFNames=Tc00.1047053504157.10 {ECO:0000313|EMBL:EAN91678.1};
OS   Trypanosoma cruzi (strain CL Brener).
OC   Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina;
OC   Trypanosomatida; Trypanosomatidae; Trypanosoma; Schizotrypanum.
OX   NCBI_TaxID=353153 {ECO:0000313|EMBL:EAN91678.1, ECO:0000313|Proteomes:UP000002296};
RN   [1] {ECO:0000313|EMBL:EAN91678.1, ECO:0000313|Proteomes:UP000002296}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CL Brener {ECO:0000313|EMBL:EAN91678.1,
RC   ECO:0000313|Proteomes:UP000002296};
RX   PubMed=16020725; DOI=10.1126/science.1112631;
RA   El-Sayed N.M., Myler P.J., Bartholomeu D.C., Nilsson D., Aggarwal G.,
RA   Tran A.N., Ghedin E., Worthey E.A., Delcher A.L., Blandin G.,
RA   Westenberger S.J., Caler E., Cerqueira G.C., Branche C., Haas B.,
RA   Anupama A., Arner E., Aslund L., Attipoe P., Bontempi E., Bringaud F.,
RA   Burton P., Cadag E., Campbell D.A., Carrington M., Crabtree J., Darban H.,
RA   da Silveira J.F., de Jong P., Edwards K., Englund P.T., Fazelina G.,
RA   Feldblyum T., Ferella M., Frasch A.C., Gull K., Horn D., Hou L., Huang Y.,
RA   Kindlund E., Klingbeil M., Kluge S., Koo H., Lacerda D., Levin M.J.,
RA   Lorenzi H., Louie T., Machado C.R., McCulloch R., McKenna A., Mizuno Y.,
RA   Mottram J.C., Nelson S., Ochaya S., Osoegawa K., Pai G., Parsons M.,
RA   Pentony M., Pettersson U., Pop M., Ramirez J.L., Rinta J., Robertson L.,
RA   Salzberg S.L., Sanchez D.O., Seyler A., Sharma R., Shetty J., Simpson A.J.,
RA   Sisk E., Tammi M.T., Tarleton R., Teixeira S., Van Aken S., Vogt C.,
RA   Ward P.N., Wickstead B., Wortman J., White O., Fraser C.M., Stuart K.D.,
RA   Andersson B.;
RT   "The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas
RT   disease.";
RL   Science 309:409-415(2005).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EAN91678.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AAHK01000502; EAN91678.1; -; Genomic_DNA.
DR   RefSeq; XP_813529.1; XM_808436.1.
DR   AlphaFoldDB; Q4DGN8; -.
DR   SMR; Q4DGN8; -.
DR   STRING; 353153.Q4DGN8; -.
DR   PaxDb; 353153-Q4DGN8; -.
DR   EnsemblProtists; EAN91678; EAN91678; Tc00.1047053504157.10.
DR   GeneID; 3544917; -.
DR   KEGG; tcr:504157.10; -.
DR   eggNOG; KOG4211; Eukaryota.
DR   InParanoid; Q4DGN8; -.
DR   OMA; GSRNRDF; -.
DR   OrthoDB; 314723at2759; -.
DR   Proteomes; UP000002296; Unassembled WGS sequence.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR   CDD; cd12254; RRM_hnRNPH_ESRPs_RBM12_like; 2.
DR   Gene3D; 3.30.70.330; -; 3.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR13976:SF76; AT27789P; 1.
DR   PANTHER; PTHR13976; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED; 1.
DR   Pfam; PF00076; RRM_1; 3.
DR   SMART; SM00360; RRM; 3.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR   PROSITE; PS50102; RRM; 3.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002296};
KW   Ribonucleoprotein {ECO:0000313|EMBL:EAN91678.1};
KW   RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT   DOMAIN          54..132
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          149..225
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   DOMAIN          341..418
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          1..27
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          238..261
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..21
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   450 AA;  50295 MW;  CE8E5F7CFA788F7E CRC64;
     MERPPQQQQQ EQQQEEQQYG TEELGAMNPD TIADAYQGEP QTGEEDIPVM IETRVVRLHG
     LPYSVSEETI RAFFAEFELD EKDPILHFTE GLHRGTGFVR LKRPEDVEES IKKLHRQHID
     ANRYVELTAS TEEERQRILE QQEQGCKTHV LRLRGLPFTS TEEDLREFVR SVPGVTRVDI
     CRDMEGRNTG DAFIQLATEE DVEEAKQLHN KTMGSRYIEV LPSTMYDRDA IMRAASLRAR
     RDRRGTRAGD SPLVGPRNHG NGVSPGAMQM LAPNFFDPFI AAACMGYMPH VSFGNELSQN
     PYERSGMPQG APYGVPGGPQ PLFPMFPGHA PMVAPRAPSP HVVRIRGVPY AATEESIAEF
     FAGVKIPPQG VHMVYNEQNR PTGEAFVELE NDSDLVAALE RNGGAMGNRY IEVFQSSVAA
     MQRLGSPLTG MMNMMQYSMP GLGVVPQPHC
//
DBGET integrated database retrieval system