GenomeNet

Database: UniProt
Entry: Q4GYS4_TRYB2
LinkDB: Q4GYS4_TRYB2
Original site: Q4GYS4_TRYB2 
ID   Q4GYS4_TRYB2            Unreviewed;      1024 AA.
AC   Q4GYS4;
DT   30-AUG-2005, integrated into UniProtKB/TrEMBL.
DT   30-AUG-2005, sequence version 1.
DT   24-JAN-2024, entry version 80.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0000259|Pfam:PF17177};
GN   ORFNames=TB927.1.2990 {ECO:0000313|EMBL:CAJ16495.1};
OS   Trypanosoma brucei brucei (strain 927/4 GUTat10.1).
OC   Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina;
OC   Trypanosomatida; Trypanosomatidae; Trypanosoma.
OX   NCBI_TaxID=185431 {ECO:0000313|EMBL:CAJ16495.1, ECO:0000313|Proteomes:UP000008524};
RN   [1] {ECO:0000313|EMBL:CAJ16495.1, ECO:0000313|Proteomes:UP000008524}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=927/4 GUTat10.1 {ECO:0000313|EMBL:CAJ16495.1,
RC   ECO:0000313|Proteomes:UP000008524};
RX   PubMed=12907729; DOI=10.1093/nar/gkg674;
RA   Hall N., Berriman M., Lennard N.J., Harris B.R., Hertz-Fowler C.,
RA   Bart-Delabesse E.N., Gerrare C.S., Atkin R.J., Barron A.J., Bowman S.,
RA   Bray-Allen S.P., Bringaud F., Clark L.N., Corton C.H., Cronin A.,
RA   Davies R., Doggett J., Fraser A., Gruter E., Hall S., Harper A.D.,
RA   Kay M.P., Leech V., Mayes R., Price C., Quail M.A., Rabbinowitch E.,
RA   Reitter C., Rutherford K., Sasse J., Sharp S., Shownkeen R., Macleod A.,
RA   Taylor S., Tweedie A., Turner C.M.R., Tait A., Gull K., Barrell B.,
RA   Melville S.E.;
RT   "The DNA sequence of chromosome I of an African trypanosome: gene content,
RT   chromosome organisation, recombination and polymorphism.";
RL   Nucleic Acids Res. 31:4864-4873(2003).
RN   [2] {ECO:0000313|Proteomes:UP000008524}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=927/4 GUTat10.1 {ECO:0000313|Proteomes:UP000008524};
RX   PubMed=16020726; DOI=10.1126/science.1112642;
RA   Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H.,
RA   Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U.,
RA   Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B.,
RA   Alsmark U.C., Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F.,
RA   Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C.,
RA   Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A.,
RA   Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D.,
RA   Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D.,
RA   Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S.,
RA   Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S.,
RA   Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G.,
RA   Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A.,
RA   Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M.,
RA   Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S.,
RA   Walker D., Wanless D., Wang S., White B., White O., Whitehead S.,
RA   Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E.,
RA   Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E.,
RA   Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.;
RT   "The genome of the African trypanosome Trypanosoma brucei.";
RL   Science 309:416-422(2005).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC       {ECO:0000256|ARBA:ARBA00007626}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AL929603; CAJ16495.1; -; Genomic_DNA.
DR   RefSeq; XP_001218997.1; XM_001218996.1.
DR   AlphaFoldDB; Q4GYS4; -.
DR   STRING; 185431.Q4GYS4; -.
DR   PaxDb; 5691-CAJ16495; -.
DR   GeneID; 4357368; -.
DR   KEGG; tbr:TB927.1.2990; -.
DR   VEuPathDB; TriTrypDB:Tb927.1.2990; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   InParanoid; Q4GYS4; -.
DR   OMA; WGVRLWR; -.
DR   OrthoDB; 168819at2759; -.
DR   Proteomes; UP000008524; Chromosome 1.
DR   GO; GO:0005737; C:cytoplasm; IDA:GeneDB.
DR   GO; GO:0005763; C:mitochondrial small ribosomal subunit; IDA:GeneDB.
DR   GO; GO:0005739; C:mitochondrion; IDA:GeneDB.
DR   GO; GO:0004526; F:ribonuclease P activity; IBA:GO_Central.
DR   GO; GO:0001682; P:tRNA 5'-leader removal; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR033443; PPR_long.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 1.
DR   PANTHER; PTHR13547:SF1; MITOCHONDRIAL RIBONUCLEASE P CATALYTIC SUBUNIT; 1.
DR   PANTHER; PTHR13547; UNCHARACTERIZED; 1.
DR   Pfam; PF01535; PPR; 1.
DR   Pfam; PF13812; PPR_3; 1.
DR   Pfam; PF17177; PPR_long; 1.
DR   PROSITE; PS51375; PPR; 2.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000008524}.
FT   DOMAIN          225..323
FT                   /note="Pentacotripeptide-repeat region of PRORP"
FT                   /evidence="ECO:0000259|Pfam:PF17177"
FT   REPEAT          240..274
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          532..567
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REGION          823..857
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          979..1024
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        981..1010
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1024 AA;  115951 MW;  C3100E98242CF24D CRC64;
     MLTPTRRLPK ALSPYAQALR HVALRGATAF GPGAKEMELD MLRKGTLPAD YRPPVQGRWD
     DTIERWAYAW QFPAEEEQDD ITKSVERNAS GMQALLEIGN KLLRSPPSPE PLSGKASKLY
     PPVGDMSSGN TALLPPNPTY DVLEQDVSEL MAEDAVVVAS QPRLRAEELS AKYNVPMAYI
     DDSSEASNAS KSLALVMEDV GLEFTEDGLT VVISALSRQG YGTIGRAIFD FASTMGLGPS
     AEMYKALMKY ASRRGDVNES MALIEEMKGN GITPRIGNWH ELMYTFYKAK DYPAVSQIVD
     NMKMYANIEP NEVTFVLQLK ALAKDNSQLN SLPEAIQLFD QMENVYGFIA SRPHYDAMMF
     HLSQSPRPEM RLRCEELAHK MELMGIVWNA NTYLNLIRSA QVVGDVAAVE KYLSRMREEG
     IPASIGHLTW AVQAHVQSMI RIDYDALKEK DESPLPTWLE HLETCFGIYE LVVRRGWVMQ
     LPFVNALLRL TCQATILSME RTPDEAETIG RFEEQANKIW NHTFDEWQLQ KDVYSYECYI
     ALLAHQQRID EAEKLFQEMI LKKDLSPSRR TYHCMIFMHL SSGEEGGTAR ALRYLEAMER
     AGIQVRPSLL KKIVRVNNAA GYKRDMKRRA RRIMQAREEY LARKAEGVSF GEGGKEGASN
     QRADVDAEGN SILEPLAVSP TSTLAWWEKW KRETVSKHEL FTEEGADGTP KGETFEEKNE
     ALRMMGITSS FQTKDLVPQP DRQKLLPLIR REEGEIAGSL WAMDGGELSY PKDGGGPQGW
     GVRLWRERQL VKREYQKVLD GYRPVPQLST LGNSVRTAGD QLDIERSGAQ TPGELSDYRN
     FPDNRFDGGQ LKPESEAAPA VPFSAELVWQ GEANDKLSPY KSDEEIALEN DNTFFSSLSK
     ETEGKLSIAV KAMQNKEENS VDVRGKGVTR RSKFDYLEKW RDMYRHGTLE VPEGPTLNFG
     RTPDDHKETM AALVRGWYQR NRKEPASEEE LKRWRVDEQR SSETSASRAA LKKRKQVRSR
     HRNK
//
DBGET integrated database retrieval system