ID Q4S5V6_TETNG Unreviewed; 214 AA.
AC Q4S5V6;
DT 19-JUL-2005, integrated into UniProtKB/TrEMBL.
DT 19-JUL-2005, sequence version 1.
DT 03-MAY-2023, entry version 58.
DE SubName: Full=Chromosome 9 SCAF14729, whole genome shotgun sequence {ECO:0000313|EMBL:CAG03976.1};
DE Flags: Fragment;
GN ORFNames=GSTENG00023563001 {ECO:0000313|EMBL:CAG03976.1};
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883 {ECO:0000313|EMBL:CAG03976.1};
RN [1] {ECO:0000313|EMBL:CAG03976.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A., Nicaud S.,
RA Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B., Dasilva C.,
RA Salanoubat M., Levy M., Boudet N., Castellano S., Anthouard V., Jubin C.,
RA Castelli V., Katinka M., Vacherie B., Biemont C., Skalli Z., Cattolico L.,
RA Poulain J., De Berardinis V., Cruaud C., Duprat S., Brottier P.,
RA Coutanceau J.-P., Gouzy J., Parra G., Lardier G., Chapple C.,
RA McKernan K.J., McEwan P., Bosak S., Kellis M., Volff J.-N., Guigo R.,
RA Zody M.C., Mesirov J., Lindblad-Toh K., Birren B., Nusbaum C., Kahn D.,
RA Robinson-Rechavi M., Laudet V., Schachter V., Quetier F., Saurin W.,
RA Scarpelli C., Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals the
RT early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2] {ECO:0000313|EMBL:CAG03976.1}
RP NUCLEOTIDE SEQUENCE.
RG Genoscope;
RG Whitehead Institute Centre for Genome Research;
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: Interacts (via N-terminus) with magoh and rbm8a; the
CC interaction is direct. Associates (eIF2A-like region) with the 40S
CC ribosomal subunit and the 48S preinitiation complex.
CC {ECO:0000256|ARBA:ARBA00025900}.
CC -!- SIMILARITY: Belongs to the pym family. {ECO:0000256|ARBA:ARBA00009394}.
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DR EMBL; CAAE01014729; CAG03976.1; -; Genomic_DNA.
DR AlphaFoldDB; Q4S5V6; -.
DR KEGG; tng:GSTEN00023563G001; -.
DR GO; GO:1903259; P:exon-exon junction complex disassembly; IEA:InterPro.
DR InterPro; IPR039333; PYM1.
DR InterPro; IPR015362; WIBG_mago-bd.
DR InterPro; IPR036348; WIBG_N_sf.
DR PANTHER; PTHR22959:SF0; PARTNER OF Y14 AND MAGO; 1.
DR PANTHER; PTHR22959; PYM PROTEIN; 1.
DR Pfam; PF09282; Mago-bind; 1.
DR SMART; SM01273; Mago-bind; 1.
DR SUPFAM; SSF101931; Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 10..36
FT /note="WIBG Mago-binding"
FT /evidence="ECO:0000259|SMART:SM01273"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 52..142
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 158..188
FT /evidence="ECO:0000256|SAM:Coils"
FT NON_TER 214
FT /evidence="ECO:0000313|EMBL:CAG03976.1"
SQ SEQUENCE 214 AA; 23525 MW; 381004D89FAF9A74 CRC64;
MATPYVTDES GKYIAATQRP DGTWRKPRRV KDGYVPQEEV PVYENKFVKF FKSKPDLPPG
MSQSDAAPTK QQQKIPGCGE GEMANLSKSA KRNMKRKEKR KQQQQQHQDE DGDGDGDGDG
DVDNLSSAVE NVTVSEDGGA KDTAAVAVTS SCSNESSAAE KAKKIKNLKK KLRQIEELQQ
KVDSGEIKEP TKDQVEKLGR AETLQAELQQ LEAG
//
