ID Q4SIK6_TETNG Unreviewed; 666 AA.
AC Q4SIK6;
DT 19-JUL-2005, integrated into UniProtKB/TrEMBL.
DT 19-JUL-2005, sequence version 1.
DT 01-MAY-2013, entry version 53.
DE SubName: Full=Chromosome 5 SCAF14581, whole genome shotgun sequence;
GN ORFNames=GSTENG00017649001;
OS Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon
OS nigroviridis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Euteleostei; Neoteleostei;
OC Acanthomorpha; Acanthopterygii; Percomorpha; Tetraodontiformes;
OC Tetradontoidea; Tetraodontidae; Tetraodon.
OX NCBI_TaxID=99883;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15496914; DOI=10.1038/nature03025;
RA Jaillon O., Aury J.-M., Brunet F., Petit J.-L., Stange-Thomann N.,
RA Mauceli E., Bouneau L., Fischer C., Ozouf-Costaz C., Bernot A.,
RA Nicaud S., Jaffe D., Fisher S., Lutfalla G., Dossat C., Segurens B.,
RA Dasilva C., Salanoubat M., Levy M., Boudet N., Castellano S.,
RA Anthouard V., Jubin C., Castelli V., Katinka M., Vacherie B.,
RA Biemont C., Skalli Z., Cattolico L., Poulain J., De Berardinis V.,
RA Cruaud C., Duprat S., Brottier P., Coutanceau J.-P., Gouzy J.,
RA Parra G., Lardier G., Chapple C., McKernan K.J., McEwan P., Bosak S.,
RA Kellis M., Volff J.-N., Guigo R., Zody M.C., Mesirov J.,
RA Lindblad-Toh K., Birren B., Nusbaum C., Kahn D., Robinson-Rechavi M.,
RA Laudet V., Schachter V., Quetier F., Saurin W., Scarpelli C.,
RA Wincker P., Lander E.S., Weissenbach J., Roest Crollius H.;
RT "Genome duplication in the teleost fish Tetraodon nigroviridis reveals
RT the early vertebrate proto-karyotype.";
RL Nature 431:946-957(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE.
RG Genoscope;
RG Whitehead Institute Centre for Genome Research;
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data.
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DR EMBL; CAAE01014581; CAF99526.1; -; Genomic_DNA.
DR ProteinModelPortal; Q4SIK6; -.
DR SMR; Q4SIK6; 8-120.
DR eggNOG; NOG42878; -.
DR HOVERGEN; HBG003072; -.
DR GO; GO:0000975; F:regulatory region DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR Gene3D; 2.60.200.10; -; 1.
DR InterPro; IPR019817; Interferon_reg_fac_CS.
DR InterPro; IPR001346; Interferon_reg_fact_DNA-bd_dom.
DR InterPro; IPR019471; Interferon_reg_factor-3.
DR InterPro; IPR017855; SMAD_dom-like.
DR InterPro; IPR008984; SMAD_FHA_domain.
DR InterPro; IPR011991; WHTH_DNA-bd_dom.
DR Pfam; PF00605; IRF; 1.
DR Pfam; PF10401; IRF-3; 1.
DR PRINTS; PR00267; INTFRNREGFCT.
DR SMART; SM00348; IRF; 1.
DR SUPFAM; SSF49879; SMAD_FHA; 1.
DR PROSITE; PS00601; IRF_1; 1.
DR PROSITE; PS51507; IRF_2; 1.
PE 4: Predicted;
SQ SEQUENCE 666 AA; 74064 MW; 0BC307DBA42426B9 CRC64;
MSNTGGRRLK QWLMEQIQSA QYAGLQWEDE SRTLFRIPWK HAGKQDYNQE VDASIFKAWA
VFKGKYKEGD KAEPATWKTR LRCALNKSPD FEEVTDRSQL DISEPYKVYR IVPEEEQKNG
KSAVMAVAAT VSGGNLMEMD CSPAELEELI KEVRPLKSHP RLPNAYPSSP PVTLHFPLCH
RASTLLWLQE DGCNIQASPE YWSHSSISTL YQMMISFYYG GKLVHSTVVN HSEGCRISPQ
HPLGRGTLYS SAGMQSVHFP PADLIEYERQ RHFTRRLLGH MERGVLVRAN QEGIFIKRLC
QSRVFWMGLA EVGPQCSPMP CKLERDAVVK IFDTERFLQA LQLYQEGQIP APDPTVTLCF
GEELHDLSSA KNKLIIVQIS VLNCQHLLES VNVRRSQPYC NNPILDVSDS AAAEQVAHIY
QDLCSYSVPQ SWESQQGQDN HMPEQKRQEQ HRRALKQIFL GLVTTVHTVH TSIESAKGKI
LLMQLQTTAS RMATSTPPNT DPLCSRGGRS NATPQFYRVD SVDSVTPAAQ KKALTPPLAP
VSQPTPGGHS VEGADMSVDC PTEHSLTSRR ASDAEPPPPW RRACLTPQFG TGDERKAGLR
HGGGSEGVLI HEDSVTSLVP DSRALSMGCG EVELGPDLAQ LEEAGDQSSV GADRSKVNSH
GHWVGR
//
