ID Q53QL5_ORYSJ Unreviewed; 555 AA.
AC Q53QL5; Q2R6I4;
DT 24-MAY-2005, integrated into UniProtKB/TrEMBL.
DT 24-MAY-2005, sequence version 1.
DT 24-JAN-2024, entry version 85.
DE RecName: Full=Gypsy retrotransposon integrase-like protein 1 {ECO:0000256|ARBA:ARBA00039658};
GN OrderedLocusNames=LOC_Os11g19940 {ECO:0000313|EMBL:ABA93006.2};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:ABA93006.2};
RN [1] {ECO:0000313|EMBL:ABA93006.2}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16188032; DOI=10.1186/1741-7007-3-20;
RG The rice chromosomes 11 and 12 sequencing consortia;
RT "The sequence of rice chromosomes 11 and 12, rich in disease resistance
RT genes and recent gene duplications.";
RL BMC Biol. 3:20-20(2005).
RN [2] {ECO:0000313|EMBL:ABA93006.2}
RP NUCLEOTIDE SEQUENCE.
RA Buell C.R., Wing R.A., McCombie W.A., Ouyang S.;
RL Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ABA93006.2}
RP NUCLEOTIDE SEQUENCE.
RA Buell R.;
RL Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DP000010; ABA93006.2; -; Genomic_DNA.
DR AlphaFoldDB; Q53QL5; -.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47266; ENDONUCLEASE-RELATED; 1.
DR PANTHER; PTHR47266:SF29; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
FT DOMAIN 360..538
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 555 AA; 61917 MW; BCFE91AE6BB70276 CRC64;
MVRKANGKWR MCVDFTDLNK ACPQGSLPSS SNRPTGGLNS WLGIEANPEK IKAIENMKSP
TRLKEVQKLT GCMAALSRLD SQTDNEMWTM AFDGALNSQG AGAGFILTSP SGDQFKHAIH
LNFRATNNTA EYEGLLAGIR AAAALGVKRL IMKGDSELVA NQVHKDYKYS SPELSKYLAE
VRKLEKRFDG IEPLEPDTFL DVLTKPSMKE ANDENSTVAP DISSRATEAE CTVADIETTD
DWRIPLIKFI SSDALPEDNA EAKKITRQAK IYCMISNDLY KKAPNRVLLK CVSSDDGKHL
LLDIHEGICG SLATGRTLVG KAFRQGFFWP TALKEACDMV QRCEACQFYS KHTKLPAQAL
QTIPLTWPFS CWGLDILGTF PRGQGSYKFL FVAIDKFTKW IEATPMGEIK ADNTIKFIKG
IFCRYGLPHR IITNNGSQFI SANFQDYYIG LGVKICFALV SHPQSNGQVE RANSIVLQGI
KTRVYDRLMS HDKKWVEELP SVLWAVRTTP TTSNKETPFF LVYGSEAMLP TELQHQSTQV
QKYSARIRRS SEATM
//