ID Q5JJI2_ORYSJ Unreviewed; 369 AA.
AC Q5JJI2;
DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2005, sequence version 1.
DT 13-SEP-2023, entry version 102.
DE SubName: Full=Os01g0921800 protein {ECO:0000313|EMBL:BAF07144.2};
GN OrderedLocusNames=Os01g0921800 {ECO:0000313|EMBL:BAF07144.2};
GN ORFNames=B1793G04.24 {ECO:0000313|EMBL:BAD88375.1};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:BAD88375.1, ECO:0000313|Proteomes:UP000000763};
RN [1] {ECO:0000313|EMBL:BAD88375.1}
RP NUCLEOTIDE SEQUENCE.
RA Sasaki T., Matsumoto T., Fujisawa M.;
RT "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 1, BAC
RT clone:B1793G04.";
RL Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:BAF07144.2, ECO:0000313|Proteomes:UP000000763}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000000763};
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RA Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N.,
RA Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y.,
RA Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N.,
RA Fukunaka R., Hamada M., Harada C., Hayashi A., Hijishita S., Honda M.,
RA Hosokawa S., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M.,
RA Ito K., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K.,
RA Karasawa W., Kurita K., Katagiri S., Kikuta A., Kobayashi H., Kobayashi N.,
RA Machita K., Maehara T., Masukawa M., Mizubayashi T., Mukai Y., Nagasaki H.,
RA Nagata Y., Naito S., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA Meguro A., Negishi M., Ohta I., Ohta T., Okamoto M., Ono N., Saji S.,
RA Sakaguchi M., Sakai K., Shibata M., Shimokawa T., Song J., Takazaki Y.,
RA Terasawa K., Tsugane M., Tsuji K., Ueda S., Waki K., Yamagata H.,
RA Yamamoto M., Yamamoto S., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA Zhong H., Yano M., Yuan Q., Ouyang S., Liu J., Jones K.M., Gansberger K.,
RA Moffat K., Hill J., Bera J., Fadrosh D., Jin S., Johri S., Kim M.,
RA Overton L., Reardon M., Tsitrin T., Vuong H., Weaver B., Ciecko A.,
RA Tallon L., Jackson J., Pai G., Aken S.V., Utterback T., Reidmuller S.,
RA Feldblyum T., Hsiao J., Zismann V., Iobst S., de Vazeille A.R., Buell C.R.,
RA Ying K., Li Y., Lu T., Huang Y., Zhao Q., Feng Q., Zhang L., Zhu J.,
RA Weng Q., Mu J., Lu Y., Fan D., Liu Y., Guan J., Zhang Y., Yu S., Liu X.,
RA Zhang Y., Hong G., Han B., Choisne N., Demange N., Orjeda G., Samain S.,
RA Cattolico L., Pelletier E., Couloux A., Segurens B., Wincker P., D'Hont A.,
RA Scarpelli C., Weissenbach J., Salanoubat M., Quetier F., Yu Y., Kim H.R.,
RA Rambo T., Currie J., Collura K., Luo M., Yang T., Ammiraju J.S.S.,
RA Engler F., Soderlund C., Wing R.A., Palmer L.E., de la Bastide M.,
RA Spiegel L., Nascimento L., Zutavern T., O'Shaughnessy A., Dike S.,
RA Dedhia N., Preston R., Balija V., McCombie W.R., Chow T., Chen H.,
RA Chung M., Chen C., Shaw J., Wu H., Hsiao K., Chao Y., Chu M., Cheng C.,
RA Hour A., Lee P., Lin S., Lin Y., Liou J., Liu S., Hsing Y., Raghuvanshi S.,
RA Mohanty A., Bharti A.K., Gaur A., Gupta V., Kumar D., Ravi V., Vij S.,
RA Kapur A., Khurana P., Khurana P., Khurana J.P., Tyagi A.K., Gaikwad K.,
RA Singh A., Dalal V., Srivastava S., Dixit A., Pal A.K., Ghazi I.A.,
RA Yadav M., Pandit A., Bhargava A., Sureshbabu K., Batra K., Sharma T.R.,
RA Mohapatra T., Singh N.K., Messing J., Nelson A.B., Fuks G., Kavchok S.,
RA Keizer G., Linton E., Llaca V., Song R., Tanyolac B., Young S., Ho-Il K.,
RA Hahn J.H., Sangsakoo G., Vanavichit A., de Mattos Luiz.A.T., Zimmer P.D.,
RA Malone G., Dellagostin O., de Oliveira A.C., Bevan M., Bancroft I.,
RA Minx P., Cordum H., Wilson R., Cheng Z., Jin W., Jiang J., Leong S.A.,
RA Iwama H., Gojobori T., Itoh T., Niimura Y., Fujii Y., Habara T., Sakai H.,
RA Sato Y., Wilson G., Kumar K., McCouch S., Juretic N., Hoen D., Wright S.,
RA Bruskiewich R., Bureau T., Miyao A., Hirochika H., Nishikawa T.,
RA Kadowaki K., Sugiura M., Burr B., Sasaki T.;
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3] {ECO:0000313|EMBL:BAF07144.2}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=16381971; DOI=10.1093/nar/gkj094;
RA Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T.,
RA Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T.,
RA Gojobori T., Sasaki T.;
RT "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp.
RT japonica genome information.";
RL Nucleic Acids Res. 34:D741-D744(2006).
RN [4] {ECO:0000313|EMBL:BAF07144.2}
RP NUCLEOTIDE SEQUENCE.
RG The Rice Annotation Project (RAP);
RA Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B.,
RA Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F.,
RA Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E.,
RA Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S., Hsing Y.,
RA Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P., Kanno M., Kawahara Y.,
RA Kawamura T., Kawashima H., Khurana J.P., Kikuchi S., Komatsu S.,
RA Koyanagi K.O., Kubooka H., Lieberherr D., Lin Y.C., Lonsdale D.,
RA Matsumoto T., Matsuya A., McCombie W.R., Messing J., Miyao A., Mulder N.,
RA Nagamura Y., Nam J., Namiki N., Numa H., Nurimoto S., O'donovan C.,
RA Ohyanagi H., Okido T., Oota S., Osato N., Palmer L.E., Quetier F.,
RA Raghuvanshi S., Saichi N., Sakai H., Sakai Y., Sakata K., Sakurai T.,
RA Sato F., Sato Y., Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K.,
RA Shinso Y., Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T.,
RA Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A., Wang A.,
RA Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y., Zhang H.,
RA Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.;
RT "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative
RT Genome Analysis with Arabidopsis thaliana.";
RL Genome Res. 17:175-183(2007).
RN [5] {ECO:0000313|EMBL:BAF07144.2}
RP NUCLEOTIDE SEQUENCE.
RG The Rice Annotation Project (RAP);
RA Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H.,
RA Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T.,
RA Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H., Matsuya A.,
RA Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y., Suzuki M.,
RA Takeda J., Tanino M., Todokoro F., Yamaguchi K., Yamamoto N., Yamasaki C.,
RA Imanishi T., Okido T., Tada M., Ikeo K., Tateno Y., Gojobori T., Lin Y.C.,
RA Wei F.J., Hsing Y.I., Zhao Q., Han B., Kramer M.R., McCombie R.W.,
RA Lonsdale D., O'Donovan C.C., Whitfield E.J., Apweiler R., Koyanagi K.O.,
RA Khurana J.P., Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G.,
RA Fujisawa M., Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M.,
RA Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H., Sakai Y.,
RA Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A.,
RA Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G., Messing J.,
RA Christie K.R., Lieberherr D., Kim H., Zuccolo A., Wing R.A., Nobuta K.,
RA Green P.J., Lu C., Meyers BC., Chaparro C., Piegu B., Panaud O.,
RA Echeverria M.;
RT "The Rice Annotation Project Database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [6] {ECO:0000313|Proteomes:UP000000763}
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000000763};
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [7] {ECO:0000313|EMBL:BAF07144.2}
RP NUCLEOTIDE SEQUENCE.
RG IRGSP(International Rice Genome Sequencing Project);
RT "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 1.";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [8] {ECO:0000313|EMBL:BAF07144.2}
RP NUCLEOTIDE SEQUENCE.
RG The Rice Annotation Project (RAP);
RT "The Second Rice Annotation Project Meeting (RAP2).";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AP006843; BAD88375.1; -; Genomic_DNA.
DR EMBL; AP008207; BAF07144.2; -; Genomic_DNA.
DR AlphaFoldDB; Q5JJI2; -.
DR SMR; Q5JJI2; -.
DR Proteomes; UP000000763; Chromosome 1.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 6.10.140.2220; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR InterPro; IPR044508; At5g50450/At1g67340-like.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR002893; Znf_MYND.
DR PANTHER; PTHR46758; MYND DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR46758:SF2; OJ1485_B09.11 PROTEIN; 1.
DR Pfam; PF01753; zf-MYND; 1.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF81901; HCP-like; 1.
DR SUPFAM; SSF144232; HIT/MYND zinc finger-like; 1.
DR PROSITE; PS50865; ZF_MYND_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00134}.
FT DOMAIN 313..355
FT /note="MYND-type"
FT /evidence="ECO:0000259|PROSITE:PS50865"
SQ SEQUENCE 369 AA; 38639 MW; 8FBDEE25FE124390 CRC64;
MVGQKRKRSS LPPQYATAGD CCGGGGRRKR LAGGGPDYLD ELPDDLVLAV LSKLAASASS
PSDLLSVHLT CKRLNGLGRH DMVFAKASPA SLAVKAASWS EPVQRFLKLC ADAGNLEACY
ILGMIRFYCL GNRSGGAALL ARAAVGGHAA ALYSLAVIQF NGSGGAKSDR DLRAGAALCA
RAAALGHVDA LRELGHCLQD GYGVRRDPAE GRRFLVAANA RELTLALAAA ASHRPFAALP
LAGGAAAGAI GCPLLSDFGW SLPEAEPHPA NLFMADWWAS RGVQATAKKP GLEAPAAATG
DSDGGGELRL CSHVRCGRRE TRRHEFRRCS VCGAANYCSR ACQALDWKRA HKAQCVPMDR
WLLAAGEAQ
//
