ID Q5KCJ0_CRYNJ Unreviewed; 1464 AA.
AC Q5KCJ0;
DT 15-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 96.
DE RecName: Full=Pentatricopeptide repeat protein {ECO:0008006|Google:ProtNLM};
GN OrderedLocusNames=CNH01190 {ECO:0000313|EMBL:AAW45002.1};
OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC
OS MYA-565) (Filobasidiella neoformans).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes;
OC Tremellales; Cryptococcaceae; Cryptococcus;
OC Cryptococcus neoformans species complex.
OX NCBI_TaxID=214684 {ECO:0000313|EMBL:AAW45002.1, ECO:0000313|Proteomes:UP000002149};
RN [1] {ECO:0000313|EMBL:AAW45002.1, ECO:0000313|Proteomes:UP000002149}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JEC21 / ATCC MYA-565 {ECO:0000313|Proteomes:UP000002149};
RX PubMed=15653466; DOI=10.1126/science.1103773;
RA Loftus B.J., Fung E., Roncaglia P., Rowley D., Amedeo P., Bruno D.,
RA Vamathevan J., Miranda M., Anderson I.J., Fraser J.A., Allen J.E.,
RA Bosdet I.E., Brent M.R., Chiu R., Doering T.L., Donlin M.J., D'Souza C.A.,
RA Fox D.S., Grinberg V., Fu J., Fukushima M., Haas B.J., Huang J.C.,
RA Janbon G., Jones S.J., Koo H.L., Krzywinski M.I., Kwon-Chung J.K.,
RA Lengeler K.B., Maiti R., Marra M.A., Marra R.E., Mathewson C.A.,
RA Mitchell T.G., Pertea M., Riggs F.R., Salzberg S.L., Schein J.E.,
RA Shvartsbeyn A., Shin H., Shumway M., Specht C.A., Suh B.B., Tenney A.,
RA Utterback T.R., Wickes B.L., Wortman J.R., Wye N.H., Kronstad J.W.,
RA Lodge J.K., Heitman J., Davis R.W., Fraser C.M., Hyman R.W.;
RT "The genome of the basidiomycetous yeast and human pathogen Cryptococcus
RT neoformans.";
RL Science 307:1321-1324(2005).
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DR EMBL; AE017348; AAW45002.1; -; Genomic_DNA.
DR RefSeq; XP_572309.1; XM_572309.1.
DR STRING; 214684.Q5KCJ0; -.
DR PaxDb; 214684-Q5KCJ0; -.
DR EnsemblFungi; AAW45002; AAW45002; CNH01190.
DR GeneID; 3259129; -.
DR KEGG; cne:CNH01190; -.
DR VEuPathDB; FungiDB:CNH01190; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002074_1_0_1; -.
DR InParanoid; Q5KCJ0; -.
DR OMA; WDIVISA; -.
DR OrthoDB; 2056457at2759; -.
DR Proteomes; UP000002149; Chromosome 8.
DR GO; GO:0005739; C:mitochondrion; IBA:GO_Central.
DR GO; GO:0032981; P:mitochondrial respiratory chain complex I assembly; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR46128; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1; 1.
DR PANTHER; PTHR46128:SF366; MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR DMR1; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR PROSITE; PS51375; PPR; 5.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002149}.
FT REPEAT 1132..1166
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1167..1197
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1313..1347
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1348..1378
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 1413..1447
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 13..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 93..121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 952..973
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1464 AA; 161293 MW; 20E2EA7F44FA593E CRC64;
MFTKATSHLR PFIRLPSSHS PASPDHFTAN PSLLHHLPQH GTSNSVIVQG QHSAQAGGAS
GHAGRTGYGG GAGAGGGYTG HARAFLSLPQ TASFDPSSTL SDERKKDASS SSSSNTSLLL
KHRLSKTPRI VHLNDSVRAR RAIEERKGGK DFTVVELEDV PRIHRRDSIA EYTSGRLPLT
STSTRSLSRS HTSFDIFQVG IPQPRSIGLR ALSTTSNAPR ALEAEDIEAV EELELMTPRA
GREVRTIGQP NRVLMDLAGR DLPSTVTAGW QLGGIRRNST AAVERPSLDL PPADLSSIAT
HEQKEDKQRE EAILQALRQA KQNGNAELVK NLITHYRSPR SLPPFSPDSL PGVPELSKHY
PLPSGYSIRI YNACLIAALA IRSPGQSIAP ILEIYNELLE KDMIPDSMTY GAVIRALAMR
ERDVRGSQEI WERQKTWGLW RSEISGNQTW DPEVAAENDA NIEAYLAENN VLSAVRLFRA
AALTGQAGRF VVSIHGTVLD ALSKLEKPDV TVMEQLVEHA ESHEVPGIIS LYKHLFLAYA
KIKDASALSQ VWNKYRGLAK TASREDWAAA CGQREAYDVR IEGAMREPWD IVISAFIEVG
ELSKAFEVFG EMAEVAEKKT KAEVPPATHR TCGVLVTALA RAGEFDLALE WFNSLQASAI
VTQNSPHRLT LEHTIVLAEQ LLLKGRWFDA ADVVIGLGGI RDELAQPSAQ HSLRTVAWKT
NFALIHHAAR STPEEAARTL ARAQEVLAAV PIQLDLRTVV LHLTLLAQAS DYTNMIRVVD
LISARKLPAN TIQRLNDACD QIAKEDIPFK YRIELIKAFG RHHADLTPFV AEKLIQAYIS
EKSKPVDERD LSKESLYILL DAFTVVEQKQ VNEGEYDEAL EQLMQDLAAT DVSEDMKNAT
SNQAIGYLVK NVIFRFGAER ARSMLGAVFG EQEATNLVQP VSPTFIQSET VSGSERLSEA
ASPSQSHASS ATSAPALSFS QTLTSSIERF TYRNPTITPL EAYALLRDGL SVSQVPRLEI
ILSLMDHLAR RNDEPKVREL YELAQVVLNS LVRPDVQAQS WYSAENAMLI ACCHLGYLEE
AGLHRARIVQ AGFTPSADAY ATMIASSKDT TDDALVAREL WEEALGMGVK PHLFLYNTVI
SKLSKARKAE SALDLFMRMK SERIRPSSVT YGAVINACCR VGDALSAETL FEEMTSQPNF
RPRVPPYNTM MQFYLQTQPN RERFLYYYGA LQRARVPPSA HTYKLLIDAY ATLPPIDIPA
MELVFAHLIA DKSVRVQGTH WASLISAYGI HAGDAKRAKE VFDKIPEKGG DYEAVVWEAW
LNVLSQQGTI EQLEEAHTRM LESGVQPTAY VYNVLINGYA RAGNIGRARE VFESMGDSIT
GVAAPNNHPV LLTSSGHAKP STQAATTGVV YREPSTYESM IRAEITCGDQ QRATEVLQRM
EERGYPMAVY MRGKAALEGE PPKF
//
