ID Q5LMK5_RUEPO Unreviewed; 268 AA.
AC Q5LMK5;
DT 01-FEB-2005, integrated into UniProtKB/TrEMBL.
DT 01-FEB-2005, sequence version 1.
DT 27-MAR-2024, entry version 105.
DE SubName: Full=Sulfite dehydrogenase iron-sulfur cluster-binding subunit SoeB cytosolic protein {ECO:0000313|EMBL:AAV96783.1};
GN Name=soeB {ECO:0000313|EMBL:AAV96783.1};
GN OrderedLocusNames=SPO3558 {ECO:0000313|EMBL:AAV96783.1};
OS Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter
OS pomeroyi).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=246200 {ECO:0000313|EMBL:AAV96783.1, ECO:0000313|Proteomes:UP000001023};
RN [1] {ECO:0000313|EMBL:AAV96783.1, ECO:0000313|Proteomes:UP000001023}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=15602564; DOI=10.1038/nature03170;
RA Moran M.A., Buchan A., Gonzalez J.M., Heidelberg J.F., Whitman W.B.,
RA Kiene R.P., Henriksen J.R., King G.M., Belas R., Fuqua C., Brinkac L.,
RA Lewis M., Johri S., Weaver B., Pai G., Eisen J.A., Rahe E., Sheldon W.M.,
RA Ye W., Miller T.R., Carlton J., Rasko D.A., Paulsen I.T., Ren Q.,
RA Daugherty S.C., Deboy R.T., Dodson R.J., Durkin A.S., Madupu R.,
RA Nelson W.C., Sullivan S.A., Rosovitz M.J., Haft D.H., Selengut J., Ward N.;
RT "Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine
RT environment.";
RL Nature 432:910-913(2004).
RN [2] {ECO:0000313|EMBL:AAV96783.1, ECO:0000313|Proteomes:UP000001023}
RP GENOME REANNOTATION.
RC STRAIN=ATCC 700808 / DSM 15171 / DSS-3
RC {ECO:0000313|Proteomes:UP000001023};
RX PubMed=25780504; DOI=10.1186/1944-3277-9-11;
RA Rivers A.R., Smith C.B., Moran M.A.;
RT "An updated genome annotation for the model marine bacterium Ruegeria
RT pomeroyi DSS-3.";
RL Stand. Genomic Sci. 9:11-11(2014).
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DR EMBL; CP000031; AAV96783.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5LMK5; -.
DR STRING; 246200.SPO3558; -.
DR PaxDb; 246200-SPO3558; -.
DR KEGG; sil:SPO3558; -.
DR eggNOG; COG0437; Bacteria.
DR HOGENOM; CLU_043374_1_1_5; -.
DR Proteomes; UP000001023; Chromosome.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd10551; PsrB; 1.
DR Gene3D; 3.30.70.20; -; 2.
DR InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR PANTHER; PTHR43177; PROTEIN NRFC; 1.
DR PANTHER; PTHR43177:SF3; PROTEIN NRFC HOMOLOG; 1.
DR Pfam; PF13247; Fer4_11; 1.
DR Pfam; PF12800; Fer4_4; 1.
DR SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR PROSITE; PS00198; 4FE4S_FER_1; 1.
DR PROSITE; PS51379; 4FE4S_FER_2; 3.
PE 4: Predicted;
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000001023}.
FT DOMAIN 31..61
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 92..123
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
FT DOMAIN 125..154
FT /note="4Fe-4S ferredoxin-type"
FT /evidence="ECO:0000259|PROSITE:PS51379"
SQ SEQUENCE 268 AA; 29437 MW; 764ECCD239DF8181 CRC64;
MPRKFVEFSC VCPWLLERDM TELPQKTDRK LGLVIDLDTC VGCHACVISC KGWNTENYGA
PLSDQDPYGA DPSGTFLNRV HSYEVQPPEG HAQLVHFPKS CLHCEDAPCV TVCPTGASYK
RSEDGIVLVN ESDCIGCGLC AWACPYGARE LDLAEGVMKK CTLCVDRIYN ENLPEEDRVP
SCVRTCPAGA RHFGDLGDPD SAVSHLVAER GGMDLMPEMG TRPVNKYLPP RPKDQIEAQI
DILAPLLAPV ADEPKGFMAW LDKALEKL
//
