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Database: UniProt
Entry: Q5QLD9_ORYSJ
LinkDB: Q5QLD9_ORYSJ
Original site: Q5QLD9_ORYSJ 
ID   Q5QLD9_ORYSJ            Unreviewed;       818 AA.
AC   Q5QLD9; Q0JHZ6;
DT   04-JAN-2005, integrated into UniProtKB/TrEMBL.
DT   04-JAN-2005, sequence version 1.
DT   27-SEP-2017, entry version 91.
DE   RecName: Full=V-type proton ATPase subunit a {ECO:0000256|RuleBase:RU361189};
GN   Name=P0460C04.33-1 {ECO:0000313|EMBL:BAD73785.1};
GN   OrderedLocusNames=Os01g0834200 {ECO:0000313|EMBL:BAF06632.2};
GN   ORFNames=OSNPB_010834200 {ECO:0000313|EMBL:BAS75086.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947 {ECO:0000313|EMBL:BAD73785.1};
RN   [1] {ECO:0000313|EMBL:BAD73785.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=12447438; DOI=10.1038/nature01184;
RA   Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y.,
RA   Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H.,
RA   Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M.,
RA   Okamoto M., Ando T., Aoki H., Arita K., Hamada M., Harada C.,
RA   Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M.,
RA   Ikeno M., Itoh S., Itoh T., Itoh Y., Itoh Y., Iwabuchi A., Kamiya K.,
RA   Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I.,
RA   Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y.,
RA   Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M.,
RA   Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M.,
RA   Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K.,
RA   Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K.,
RA   Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.I., Eun M.Y.,
RA   Yano M., Jiang J., Gojobori T.;
RT   "The genome sequence and structure of rice chromosome 1.";
RL   Nature 420:312-316(2002).
RN   [2] {ECO:0000313|EMBL:BAG94648.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N.,
RA   Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K.,
RA   Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K.,
RA   Shishiki T., Otomo Y., Murakami K., Iida Y., Sugano S., Fujimura T.,
RA   Suzuki Y., Tsunoda Y., Kurosaki T., Kodama T., Masuda H.,
RA   Kobayashi M., Xie Q., Lu M., Narikawa R., Sugiyama A., Mizuno K.,
RA   Yokomizo S., Niikura J., Ikeda R., Ishibiki J., Kawamata M.,
RA   Yoshimura A., Miura J., Kusumegi T., Oka M., Ryu R., Ueda M.,
RA   Matsubara K., Kawai J., Carninci P., Adachi J., Aizawa K., Arakawa T.,
RA   Fukuda S., Hara A., Hashidume W., Hayatsu N., Imotani K., Ishii Y.,
RA   Itoh M., Kagawa I., Kondo S., Konno H., Miyazaki A., Osato N., Ota Y.,
RA   Saito R., Sasaki D., Sato K., Shibata K., Shinagawa A., Shiraki T.,
RA   Yoshino M., Hayashizaki Y.;
RT   "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from
RT   japonica Rice.";
RL   Science 301:376-379(2003).
RN   [3] {ECO:0000313|EMBL:BAF06632.2, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [4] {ECO:0000313|EMBL:BAF06632.2}
RP   NUCLEOTIDE SEQUENCE.
RG   IRGSP(International Rice Genome Sequencing Project);
RT   "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 1.";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:BAF06632.2}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RT   "The Second Rice Annotation Project Meeting (RAP2).";
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:BAF06632.2}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=16381971; DOI=10.1093/nar/gkj094;
RA   Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K.,
RA   Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K.,
RA   Itoh T., Gojobori T., Sasaki T.;
RT   "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa
RT   ssp. japonica genome information.";
RL   Nucleic Acids Res. 34:D741-D744(2006).
RN   [7] {ECO:0000313|EMBL:BAF06632.2}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B.,
RA   Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T.,
RA   Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B.,
RA   Harada E., Hiraki A.T., Hirochika H., Hoen D., Hokari H., Hosokawa S.,
RA   Hsing Y., Ikawa H., Ikeo K., Imanishi T., Ito Y., Jaiswal P.,
RA   Kanno M., Kawahara Y., Kawamura T., Kawashima H., Khurana J.P.,
RA   Kikuchi S., Komatsu S., Koyanagi K.O., Kubooka H., Lieberherr D.,
RA   Lin Y.C., Lonsdale D., Matsumoto T., Matsuya A., McCombie W.R.,
RA   Messing J., Miyao A., Mulder N., Nagamura Y., Nam J., Namiki N.,
RA   Numa H., Nurimoto S., O'donovan C., Ohyanagi H., Okido T., Oota S.,
RA   Osato N., Palmer L.E., Quetier F., Raghuvanshi S., Saichi N.,
RA   Sakai H., Sakai Y., Sakata K., Sakurai T., Sato F., Sato Y.,
RA   Schoof H., Seki M., Shibata M., Shimizu Y., Shinozaki K., Shinso Y.,
RA   Singh N.K., Smith-White B., Takeda J., Tanino M., Tatusova T.,
RA   Thongjuea S., Todokoro F., Tsugane M., Tyagi A.K., Vanavichit A.,
RA   Wang A., Wing R.A., Yamaguchi K., Yamamoto M., Yamamoto N., Yu Y.,
RA   Zhang H., Zhao Q., Higo K., Burr B., Gojobori T., Sasaki T.;
RT   "Curated Genome Annotation of Oryza sativa ssp. japonica and
RT   Comparative Genome Analysis with Arabidopsis thaliana.";
RL   Genome Res. 17:175-183(2007).
RN   [8] {ECO:0000313|EMBL:BAF06632.2}
RP   NUCLEOTIDE SEQUENCE.
RG   The Rice Annotation Project (RAP);
RA   Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y.,
RA   Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y.,
RA   Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H.,
RA   Matsuya A., Nakaoka H., Saichi N., Sanbonmatsu R., Sato Y., Shinso Y.,
RA   Suzuki M., Takeda J., Tanino M., Todokoro F., Yamaguchi K.,
RA   Yamamoto N., Yamasaki C., Imanishi T., Okido T., Tada M., Ikeo K.,
RA   Tateno Y., Gojobori T., Lin Y.C., Wei F.J., Hsing Y.I., Zhao Q.,
RA   Han B., Kramer M.R., McCombie R.W., Lonsdale D., O'Donovan C.C.,
RA   Whitfield E.J., Apweiler R., Koyanagi K.O., Khurana J.P.,
RA   Raghuvanshi S., Singh N.K., Tyagi A.K., Haberer G., Fujisawa M.,
RA   Hosokawa S., Ito Y., Ikawa H., Shibata M., Yamamoto M.,
RA   Bruskiewich R.M., Hoen D.R., Bureau TE., Namiki N., Ohyanagi H.,
RA   Sakai Y., Nobushima S., Sakata K., Barrero R.A., Sato Y., Souvorov A.,
RA   Smith-White B., Tatusova T., An S., An G., OOta S., Fuks G.,
RA   Messing J., Christie K.R., Lieberherr D., Kim H., Zuccolo A.,
RA   Wing R.A., Nobuta K., Green P.J., Lu C., Meyers BC., Chaparro C.,
RA   Piegu B., Panaud O., Echeverria M.;
RT   "The Rice Annotation Project Database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [9] {ECO:0000313|EMBL:BAS75086.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23299411; DOI=10.1093/pcp/pcs183;
RA   Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y.,
RA   Wakimoto H., Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A.,
RA   Inokuchi H., Ikemura T., Matsumoto T., Sasaki T., Itoh T.;
RT   "Rice Annotation Project Database (RAP-DB): an integrative and
RT   interactive database for rice genomics.";
RL   Plant Cell Physiol. 54:E6-E6(2013).
RN   [10] {ECO:0000313|EMBL:BAS75086.1, ECO:0000313|Proteomes:UP000059680}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare {ECO:0000313|Proteomes:UP000059680};
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
RA   McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
RA   Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
RA   Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
RA   Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using
RT   next generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [11] {ECO:0000313|EMBL:BAS75086.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Millard Andrew;
RL   Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Essential component of the vacuolar proton pump (V-
CC       ATPase), a multimeric enzyme that catalyzes the translocation of
CC       protons across the membranes. Required for assembly and activity
CC       of the V-ATPase. {ECO:0000256|RuleBase:RU361189}.
CC   -!- SIMILARITY: Belongs to the V-ATPase 116 kDa subunit family.
CC       {ECO:0000256|RuleBase:RU361189}.
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DR   EMBL; AP004366; BAD73785.1; -; Genomic_DNA.
DR   EMBL; AP008207; BAF06632.2; -; Genomic_DNA.
DR   EMBL; AK100543; BAG94648.1; -; mRNA.
DR   EMBL; AP014957; BAS75086.1; -; Genomic_DNA.
DR   RefSeq; XP_015620007.1; XM_015764521.1.
DR   UniGene; Os.14624; -.
DR   STRING; 39947.LOC_Os01g61780.1; -.
DR   EnsemblPlants; OS01T0834200-01; OS01T0834200-01; OS01G0834200.
DR   EnsemblPlants; OS01T0834200-03; OS01T0834200-03; OS01G0834200.
DR   GeneID; 4327412; -.
DR   Gramene; OS01T0834200-01; OS01T0834200-01; OS01G0834200.
DR   Gramene; OS01T0834200-03; OS01T0834200-03; OS01G0834200.
DR   KEGG; osa:4327412; -.
DR   eggNOG; KOG2189; Eukaryota.
DR   eggNOG; COG1269; LUCA.
DR   HOGENOM; HOG000037059; -.
DR   KO; K02154; -.
DR   OMA; TIPSFMN; -.
DR   OrthoDB; EOG093602BG; -.
DR   Proteomes; UP000059680; Chromosome 1.
DR   GO; GO:0005768; C:endosome; IEA:EnsemblPlants.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0000325; C:plant-type vacuole; IBA:GO_Central.
DR   GO; GO:0005802; C:trans-Golgi network; IEA:EnsemblPlants.
DR   GO; GO:0012510; C:trans-Golgi network transport vesicle membrane; IEA:EnsemblPlants.
DR   GO; GO:0016471; C:vacuolar proton-transporting V-type ATPase complex; IBA:GO_Central.
DR   GO; GO:0000220; C:vacuolar proton-transporting V-type ATPase, V0 domain; IEA:InterPro.
DR   GO; GO:0051117; F:ATPase binding; IBA:GO_Central.
DR   GO; GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IBA:GO_Central.
DR   GO; GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
DR   GO; GO:0015986; P:ATP synthesis coupled proton transport; IBA:GO_Central.
DR   GO; GO:0007035; P:vacuolar acidification; IBA:GO_Central.
DR   GO; GO:0070072; P:vacuolar proton-transporting V-type ATPase complex assembly; IBA:GO_Central.
DR   InterPro; IPR002490; V-ATPase_116kDa_su.
DR   InterPro; IPR026028; V-type_ATPase_116kDa_su_euka.
DR   PANTHER; PTHR11629; PTHR11629; 1.
DR   Pfam; PF01496; V_ATPase_I; 1.
DR   PIRSF; PIRSF001293; ATP6V0A1; 1.
PE   2: Evidence at transcript level;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000059680};
KW   Hydrogen ion transport {ECO:0000256|RuleBase:RU361189};
KW   Ion transport {ECO:0000256|RuleBase:RU361189};
KW   Membrane {ECO:0000256|RuleBase:RU361189};
KW   Reference proteome {ECO:0000313|Proteomes:UP000059680};
KW   Transmembrane {ECO:0000256|RuleBase:RU361189};
KW   Transmembrane helix {ECO:0000256|RuleBase:RU361189};
KW   Transport {ECO:0000256|RuleBase:RU361189}.
FT   TRANSMEM    422    446       Helical. {ECO:0000256|RuleBase:RU361189}.
FT   TRANSMEM    467    484       Helical. {ECO:0000256|RuleBase:RU361189}.
FT   TRANSMEM    547    565       Helical. {ECO:0000256|RuleBase:RU361189}.
FT   TRANSMEM    585    602       Helical. {ECO:0000256|RuleBase:RU361189}.
FT   TRANSMEM    637    654       Helical. {ECO:0000256|RuleBase:RU361189}.
FT   TRANSMEM    755    774       Helical. {ECO:0000256|RuleBase:RU361189}.
FT   COILED       99    126       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   818 AA;  93041 MW;  373231A0279734DA CRC64;
     MGVFDRLPPM DRLRSEKMCF VQLIIPAESA RLAVTYLGEL GLLQFKDLNE DKSPFQRIFV
     NQVKRCSEMS RKLRFFNDQI NKAGVKSSVR PAMQPDIDLE ELEAKLREHE NDLLEMNTNS
     EKLLQTYNEL LEFKMVLSKA GGILASSHNH AAPAERELDE HIYDKEMDDG NAYLLEQGVH
     LGASENSGVK FVSGIILKSK AMAFERMLFR ATRGNMFFNQ APAGEPVTDP ISGEEVEKTV
     FVVFFSGDQA KAKILKICGS FGASCYPVPE EMVKQRQIFR EVSGRLADLE ATLDAGIQHR
     NKALESVGSQ LWRWTIMVKK EKAVYDTLNM LNFDVTKKCL VGEGWCPIFA KSQIKDVLQR
     ATLHSNSQVG IIFHEMDTID SPPTYFQTDK FTNAFQEIVD AYGIARYEEA NPAVYSVITF
     PFLFAVMFGD WGHGICLLLG ACVLILREKK LSSQKLGSFM EMAFGGRYVI LLMALFSIYC
     GLIYNEFFSV PFHIFGKSAY ECREKTCSDA HTAGLIKVRD PYPFGVDPSW RGSRSELPFL
     NSLKMKMSIL MGVTQMNLGI VLSYFDAKFH GNALDIRYQF IPQMIFLNSL FGYLALLILI
     KWCTGSQADL YHVMIYMFLD PSGNLGENQL FWGQKELQIL LLLMAIVAVP WMLFPKPFIL
     KKLHKERFQG HTYRFLGTSE MDPDSEPDSA RSRHDDFNFS EVFVHQMIHS IEFVLGAVSN
     TASYLRLWAL SLAHSELSTV FYEKLLVLAW GYDNLVVKLV GLVIFSFATA FILLGMESLS
     AFLHALRLHW VEFMNKFYHG DGYKFRPFSF ALLADDED
//
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