ID Q5QVY0_IDILO Unreviewed; 681 AA.
AC Q5QVY0;
DT 04-JAN-2005, integrated into UniProtKB/TrEMBL.
DT 04-JAN-2005, sequence version 1.
DT 27-MAR-2024, entry version 110.
DE SubName: Full=Intracellular signaling protein (2 PAS, GGDEF,EAL domains) {ECO:0000313|EMBL:AAV83154.1};
GN OrderedLocusNames=IL2322 {ECO:0000313|EMBL:AAV83154.1};
OS Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Idiomarinaceae; Idiomarina.
OX NCBI_TaxID=283942 {ECO:0000313|EMBL:AAV83154.1, ECO:0000313|Proteomes:UP000001171};
RN [1] {ECO:0000313|EMBL:AAV83154.1, ECO:0000313|Proteomes:UP000001171}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-735 / DSM 15497 / L2-TR
RC {ECO:0000313|Proteomes:UP000001171};
RX PubMed=15596722; DOI=10.1073/pnas.0407638102;
RA Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y.,
RA Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S.,
RA Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S.,
RA Denery J., Aizawa S., Shibata S., Malahoff A., Alam M.;
RT "Genome sequence of the deep-sea gamma-proteobacterium Idiomarina
RT loihiensis reveals amino acid fermentation as a source of carbon and
RT energy.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004).
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DR EMBL; AE017340; AAV83154.1; -; Genomic_DNA.
DR RefSeq; WP_011235548.1; NC_006512.1.
DR AlphaFoldDB; Q5QVY0; -.
DR STRING; 283942.IL2322; -.
DR KEGG; ilo:IL2322; -.
DR eggNOG; COG2202; Bacteria.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_20_6; -.
DR OrthoDB; 6341453at2; -.
DR Proteomes; UP000001171; Chromosome.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR013655; PAS_fold_3.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 2.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF71; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF08447; PAS_3; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 2.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 2.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001171}.
FT DOMAIN 35..81
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 84..135
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 136..205
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 213..263
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 291..422
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 431..681
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 681 AA; 76753 MW; 68EA2F05FC6EA879 CRC64;
MVDKSPEQRE KELLTSVETM ANIGSFWYEP ASGDLYWSPQ LREIHGVAQD EPITYEQAMA
FHLPEYRENI EHLVEQSFQN HHSWSAESCL KDRDGRIHWI AITSITRTLK NGDMALFGAI
QDITVKKYRL QQLQEQANTL RSTLDNLLDA VITIDNNGMI INFSVPAERM FGYSAAEVKG
KNVSVLMPEP YAREHDRYIS AYQKTGHARI IGIGREVQAK RKTGEVFPID LAVTEVTYSG
ETQYVGVIRD ITEQKENARK LEYLANFDEQ TGLPNRHRFL DLVEKRIESQ LPIVVAAVNI
DYFNRVNTIH GHEEGDRVIQ LIAQRMRKTI GDSGWIARDL GDRFWVGVMQ DSTETSLAII
DKLHGVLREP FKTAFQTHYL TASVGVSLSG GDENASGLLS QADTATSNAR HSGRDKVAVH
RAEISNSVVT DAETEVALRA SLGKGQFECW LQSKVDTNGV VRGAEALMRW RNEAGEIIPP
DQFIPIAERF KLIIPMAKEL LSQVAFVVRQ LSDKGLNDRI AVNVSPIEFL QDDYVETVQR
IFAEQNAPLN QLTIEITENL LLADPEIVEQ TMSRLAELGV VFSIDDFGTG YSNFMRIQQL
PIGELKIDRE FVQLAEVNDK HMGLLLAMLN MTKSLSVSSV AEGVETETQV KLLKENGADL
LQGFYFARPV HFKDWLSERL S
//
