ID Q5R026_IDILO Unreviewed; 292 AA.
AC Q5R026;
DT 04-JAN-2005, integrated into UniProtKB/TrEMBL.
DT 04-JAN-2005, sequence version 1.
DT 27-MAR-2024, entry version 119.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAV81308.1};
GN OrderedLocusNames=IL0465 {ECO:0000313|EMBL:AAV81308.1};
OS Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Idiomarinaceae; Idiomarina.
OX NCBI_TaxID=283942 {ECO:0000313|EMBL:AAV81308.1, ECO:0000313|Proteomes:UP000001171};
RN [1] {ECO:0000313|EMBL:AAV81308.1, ECO:0000313|Proteomes:UP000001171}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-735 / DSM 15497 / L2-TR
RC {ECO:0000313|Proteomes:UP000001171};
RX PubMed=15596722; DOI=10.1073/pnas.0407638102;
RA Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y.,
RA Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S.,
RA Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S.,
RA Denery J., Aizawa S., Shibata S., Malahoff A., Alam M.;
RT "Genome sequence of the deep-sea gamma-proteobacterium Idiomarina
RT loihiensis reveals amino acid fermentation as a source of carbon and
RT energy.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; AE017340; AAV81308.1; -; Genomic_DNA.
DR RefSeq; WP_011233726.1; NC_006512.1.
DR AlphaFoldDB; Q5R026; -.
DR STRING; 283942.IL0465; -.
DR DNASU; 3173727; -.
DR KEGG; ilo:IL0465; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_35_0_6; -.
DR OrthoDB; 9786526at2; -.
DR Proteomes; UP000001171; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF40; HTH-TYPE TRANSCRIPTIONAL REGULATOR GLTR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000001171};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 292 AA; 32999 MW; 10740FDFDDCE7505 CRC64;
MNLSHLKMMI TVANLGSLQK TAEQLNRTQS AVSMALKKLE ENAGFALFNR DGYRLELTEQ
GQHFLRQAEE VVRQQQRLQS LATQLKHGAE PLLTLCYDHT CDSKLWVPSI QHIQQQYPTT
ELHVDGESQM RALKRIDNGS ADLALCPWLP LFRQYGDFET LPVAPFELTV VISTALMKEF
GRMPQSRQDL LELPMLVPQN LEIGINLDAV LRLPSQQRIR VNEVNTQFEL LMAGFGWGII
PKHIALDALE QGKLVEISIP GFVQQVRLEI HLVRSANRTL GPAANAIWES FA
//
