ID Q5R095_IDILO Unreviewed; 537 AA.
AC Q5R095;
DT 04-JAN-2005, integrated into UniProtKB/TrEMBL.
DT 04-JAN-2005, sequence version 1.
DT 27-MAR-2024, entry version 113.
DE SubName: Full=Possible regulatory protein containing AAA-type ATPase domain {ECO:0000313|EMBL:AAV81378.1};
GN OrderedLocusNames=IL0537 {ECO:0000313|EMBL:AAV81378.1};
OS Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Idiomarinaceae; Idiomarina.
OX NCBI_TaxID=283942 {ECO:0000313|EMBL:AAV81378.1, ECO:0000313|Proteomes:UP000001171};
RN [1] {ECO:0000313|EMBL:AAV81378.1, ECO:0000313|Proteomes:UP000001171}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-735 / DSM 15497 / L2-TR
RC {ECO:0000313|Proteomes:UP000001171};
RX PubMed=15596722; DOI=10.1073/pnas.0407638102;
RA Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y.,
RA Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S.,
RA Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S.,
RA Denery J., Aizawa S., Shibata S., Malahoff A., Alam M.;
RT "Genome sequence of the deep-sea gamma-proteobacterium Idiomarina
RT loihiensis reveals amino acid fermentation as a source of carbon and
RT energy.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004).
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DR EMBL; AE017340; AAV81378.1; -; Genomic_DNA.
DR RefSeq; WP_011233795.1; NC_006512.1.
DR AlphaFoldDB; Q5R095; -.
DR STRING; 283942.IL0537; -.
DR KEGG; ilo:IL0537; -.
DR eggNOG; COG2204; Bacteria.
DR HOGENOM; CLU_506963_0_0_6; -.
DR OrthoDB; 9771372at2; -.
DR Proteomes; UP000001171; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001171}.
FT DOMAIN 187..417
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 537 AA; 61183 MW; 03DC03199E619E5C CRC64;
MKRDYEHLEA NLSCLVSRYS EDPEQAKQVF SSLFHEFLTG EIGKQLKHSL KERYESITPP
SDEASKLFNV LSKKSDEKLI ELMSELSAAE RGREYGELGL THLSAQLRRP LVLHLCDALF
KPENSKLLDE LVNYLIQSGM RSLDSNMALR WEWTEELNDR AKEFLAKLQL AVAKDGVPDL
DMNKEGPVMI CGPTGSGKTL IAKLLADSLF ESKLISLNIA AVTDSVLESR IRGHTKGAFT
GASQQVKPIF ASAHNGVLVF DELQSASRQS QTQLLDLLHS ISDKVQVAPM GSHESSLYQV
RTLFLVNEPL NELLNSNELR LDFLHRMRQI VTFPSLHERL NQKTKNLKLL PALISLMKLS
FILNYSSDGH FSDISRAQLF DIIWNLKLED EAEAQLRHYS WPGNLREFER LFTDLFHEQL
LLDRKSNTIK LIKRSFFRDF ALATEQRQAE AKGLGDENRL SEAESSDLNE VEQLKVKLVS
DALRENNFVL KDTYEALKNY DVGLGHHKAL KLFLLGYTAH FPEGIRHWIN EKHVQNA
//
