ID Q5R2F1_9POTV Unreviewed; 596 AA.
AC Q5R2F1;
DT 04-JAN-2005, integrated into UniProtKB/TrEMBL.
DT 04-JAN-2005, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE Flags: Fragment;
OS Watermelon mosaic virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC Patatavirales; Potyviridae; Potyvirus.
OX NCBI_TaxID=146500 {ECO:0000313|EMBL:BAD74199.1};
RN [1] {ECO:0000313|EMBL:BAD74199.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Pak {ECO:0000313|EMBL:BAD74199.1};
RX DOI=10.1111/j.1439-0434.2004.00915.x;
RA Ali A., Natsuaki T., Okuda S.;
RT "Identification and molecular characterization of viruses infecting
RT cucurbits in Pakistan.";
RL J. Phytopathol. 152:677-682(2004).
CC -!- FUNCTION: Involved in aphid transmission, cell-to-cell and systemis
CC movement, encapsidation of the viral RNA and in the regulation of viral
CC RNA amplification. {ECO:0000256|ARBA:ARBA00029405}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC -!- SIMILARITY: Belongs to the potyviridae genome polyprotein family.
CC {ECO:0000256|ARBA:ARBA00006064, ECO:0000256|RuleBase:RU003351}.
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DR EMBL; AB127934; BAD74199.1; -; Genomic_RNA.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR CDD; cd23175; ps-ssRNAv_Potyviridae_RdRp; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001592; Poty_coat.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR Pfam; PF00767; Poty_coat; 1.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953};
KW Virion {ECO:0000256|ARBA:ARBA00022844}.
FT DOMAIN 40..164
FT /note="RdRp catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50507"
FT REGION 326..366
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 339..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:BAD74199.1"
SQ SEQUENCE 596 AA; 67934 MW; 056F1A606D35C8E5 CRC64;
CVDDFNNQFY SFNLKCPWTV GMTKFYGGWD KLMRSLPDGW TYCHADGSQF DSSLTPLLLN
AVLSIRCCFM EDWWVGKEML ENLYAEIVYT PILAPDGTIF KKFRGNNSGQ PSTVVDNTLM
VVIAMYYSCC KQGWSEKDIE ERLVFFANGD DIILAVRDED VWLYDTLSAS FAELGLNYNF
DERTKKREEL WFMSHQAMLV DGIYIPKLEP ERIVSILEWD RSKELMHRTE AICAAMIEAW
GHTELLQEIR KFYLWLLSKD EFKELAASGK APYIAETALR KLYTDVNTQP SELQRYLEVL
DFNHIDGCCE SVSLQSGKEA VENLDAGKDS KKDTSGKGDK PQNSQTGQGS KEQTKIGTVS
KDVNVGSKGK EVPRLQKITK KMNLPTVGGK IILSLDHLLE YKPNQVDLFN TRATKTQFES
WYSAVKVEYD LNDEQMGVIM NGFMVWCIDN GTSPDVNGVW VMMDGEEQVE YPLKPIVENA
KPTLRQIMHH FSDAAEAYIE MRNSESPYMP RYGLLRNLRD RELARYAFDF YEVTSKTPNR
AREAIAQMKA AALAGINSRL FGLDGNISTN SENTERHTAR DVNQNMHTLL GMGPPQ
//
