GenomeNet

Database: UniProt
Entry: Q5V1F9_HALMA
LinkDB: Q5V1F9_HALMA
Original site: Q5V1F9_HALMA 
ID   Q5V1F9_HALMA            Unreviewed;       235 AA.
AC   Q5V1F9;
DT   07-DEC-2004, integrated into UniProtKB/TrEMBL.
DT   07-DEC-2004, sequence version 1.
DT   24-JAN-2024, entry version 87.
DE   SubName: Full=Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:QCP91356.1};
GN   OrderedLocusNames=rrnAC1742 {ECO:0000313|EMBL:AAV46643.1};
GN   ORFNames=E6P14_11045 {ECO:0000313|EMBL:QCP91356.1};
OS   Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM
OS   B-1809) (Halobacterium marismortui).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC   Haloarculaceae; Haloarcula.
OX   NCBI_TaxID=272569 {ECO:0000313|EMBL:AAV46643.1, ECO:0000313|Proteomes:UP000001169};
RN   [1] {ECO:0000313|EMBL:AAV46643.1, ECO:0000313|Proteomes:UP000001169}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43049 {ECO:0000313|EMBL:AAV46643.1}, and ATCC 43049 / DSM
RC   3752 / JCM 8966 / VKM B-1809 {ECO:0000313|Proteomes:UP000001169};
RX   PubMed=15520287; DOI=10.1101/gr.2700304;
RA   Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W.,
RA   Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E.,
RA   Hood L., Ng W.V.;
RT   "Genome sequence of Haloarcula marismortui: a halophilic archaeon from the
RT   Dead Sea.";
RL   Genome Res. 14:2221-2234(2004).
RN   [2] {ECO:0000313|EMBL:QCP91356.1, ECO:0000313|Proteomes:UP000298722}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 43049 {ECO:0000313|EMBL:QCP91356.1,
RC   ECO:0000313|Proteomes:UP000298722};
RA   DasSarma S., DasSarma P., DasSarma S., Fomenkov A., Vincze T., Anton B.P.,
RA   Roberts R.J.;
RT   "Methylomes of two halophilic Archaea, Haloarcula marismortui and Haloferax
RT   mediterranei.";
RL   Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AY596297; AAV46643.1; -; Genomic_DNA.
DR   EMBL; CP039138; QCP91356.1; -; Genomic_DNA.
DR   RefSeq; WP_004957768.1; NZ_CP039138.1.
DR   AlphaFoldDB; Q5V1F9; -.
DR   STRING; 272569.rrnAC1742; -.
DR   PaxDb; 272569-rrnAC1742; -.
DR   EnsemblBacteria; AAV46643; AAV46643; rrnAC1742.
DR   GeneID; 64821694; -.
DR   KEGG; hma:rrnAC1742; -.
DR   PATRIC; fig|272569.17.peg.2422; -.
DR   eggNOG; arCOG04060; Archaea.
DR   HOGENOM; CLU_077869_0_0_2; -.
DR   OMA; KMAGEIT; -.
DR   Proteomes; UP000001169; Chromosome I.
DR   Proteomes; UP000298722; Chromosome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   InterPro; IPR017271; Tscrpt_reg_HTH_MJ1545_prd.
DR   Pfam; PF01381; HTH_3; 1.
DR   PIRSF; PIRSF037724; TF_HTH_MJ1545_prd; 1.
DR   SMART; SM00530; HTH_XRE; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001169}.
FT   DOMAIN          27..81
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   235 AA;  25653 MW;  D7025E0D02FEBEE5 CRC64;
     MAGGARDDLA EKMAGEVALS DDPGATLRKW RTDFDVAQTE LADELDVSPS VVSDYESGRR
     DNPGIGVVRR LVVALLDIDE NRGGDHIRQH ARVLSAGFDS DVVHDLREYS ANVGVERVYD
     AIDAEELFRG SQDTVAGHTV INSIAAITRL SSDEFYQLYG QSTNRALVFT NVTRGESPLV
     ALRVVSPTPN AVILHGLEDE AVWEHAQDLA RIDDFSLAIT DIELEDLLGG LRELP
//
DBGET integrated database retrieval system