ID Q5V6H5_HALMA Unreviewed; 271 AA.
AC Q5V6H5;
DT 07-DEC-2004, integrated into UniProtKB/TrEMBL.
DT 07-DEC-2004, sequence version 1.
DT 27-MAR-2024, entry version 107.
DE SubName: Full=IclR family transcriptional regulator {ECO:0000313|EMBL:QCP90280.1};
DE SubName: Full=Transcription regulator {ECO:0000313|EMBL:AAV44877.1};
GN Name=arcR3 {ECO:0000313|EMBL:AAV44877.1};
GN OrderedLocusNames=pNG7171 {ECO:0000313|EMBL:AAV44877.1};
GN ORFNames=E6P14_04740 {ECO:0000313|EMBL:QCP90280.1};
OS Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM
OS B-1809) (Halobacterium marismortui).
OG Plasmid pHMA411 {ECO:0000313|EMBL:QCP90280.1},
OG Plasmid pNG700 {ECO:0000313|EMBL:AAV44877.1,
OG ECO:0000313|Proteomes:UP000001169}, and
OG Plasmid phma411 {ECO:0000313|Proteomes:UP000298722}.
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Haloarculaceae; Haloarcula.
OX NCBI_TaxID=272569 {ECO:0000313|EMBL:AAV44877.1, ECO:0000313|Proteomes:UP000001169};
RN [1] {ECO:0000313|EMBL:AAV44877.1, ECO:0000313|Proteomes:UP000001169}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43049 {ECO:0000313|EMBL:AAV44877.1}, and ATCC 43049 / DSM
RC 3752 / JCM 8966 / VKM B-1809 {ECO:0000313|Proteomes:UP000001169};
RC PLASMID=Plasmid pNG700 {ECO:0000313|Proteomes:UP000001169}, and pNG700
RC {ECO:0000313|EMBL:AAV44877.1};
RX PubMed=15520287; DOI=10.1101/gr.2700304;
RA Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W.,
RA Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E.,
RA Hood L., Ng W.V.;
RT "Genome sequence of Haloarcula marismortui: a halophilic archaeon from the
RT Dead Sea.";
RL Genome Res. 14:2221-2234(2004).
RN [2] {ECO:0000313|EMBL:QCP90280.1, ECO:0000313|Proteomes:UP000298722}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43049 {ECO:0000313|EMBL:QCP90280.1,
RC ECO:0000313|Proteomes:UP000298722};
RC PLASMID=phma411 {ECO:0000313|Proteomes:UP000298722}, and pHMA411
RC {ECO:0000313|EMBL:QCP90280.1};
RA DasSarma S., DasSarma P., DasSarma S., Fomenkov A., Vincze T., Anton B.P.,
RA Roberts R.J.;
RT "Methylomes of two halophilic Archaea, Haloarcula marismortui and Haloferax
RT mediterranei.";
RL Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AY596296; AAV44877.1; -; Genomic_DNA.
DR EMBL; CP039137; QCP90280.1; -; Genomic_DNA.
DR AlphaFoldDB; Q5V6H5; -.
DR DNASU; 3127324; -.
DR EnsemblBacteria; AAV44877; AAV44877; pNG7171.
DR KEGG; hma:pNG7171; -.
DR PATRIC; fig|272569.17.peg.609; -.
DR HOGENOM; CLU_062618_6_1_2; -.
DR Proteomes; UP000001169; Plasmid pNG700.
DR Proteomes; UP000298722; Plasmid phma411.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF35; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:AAV44877.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000001169};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 18..77
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 78..265
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 271 AA; 30420 MW; 79BCCD02B714D864 CRC64;
MINENQHMTE REPSTRRIKS MQTASEVLRE LQSQSEATLS DLCGNIDVAK STLHTYLQTL
VAEGFIDKSD GVYRLGLRFI PLGESVRNRI DLYQLGKEEV KRLAEETNEW VHLTVAYRSR
EVTLYEHNGG ETVAVDYQRR TRESPQYLHC TATGKALLAY FDDDRVTETV ATEGLVQQTE
QTITDPDELR EELEEIRARG YAVNDEEEIR GMRSVGAPIQ DVDGTVCGAI SVTAPKTRLS
GDYLYNDLPE LVMEAANIIE INLESAAASG E
//
