ID Q5Y0S2_9ALPH Unreviewed; 1226 AA.
AC Q5Y0S2;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 06-MAR-2013, entry version 52.
DE RecName: Full=DNA polymerase;
DE EC=2.7.7.7;
GN Name=UL30;
OS Cercopithecine herpesvirus 2.
OC Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae;
OC Alphaherpesvirinae; Simplexvirus.
OX NCBI_TaxID=10317;
RN [1]
RP NUCLEOTIDE SEQUENCE.
RX PubMed=15629785; DOI=10.1016/j.virol.2004.09.042;
RA Tyler S.D., Peters G.A., Severini A.;
RT "Complete genome sequence of cercopithecine herpesvirus 2 (SA8) and
RT comparison with other simplexviruses.";
RL Virology 331:429-440(2005).
CC -!- CATALYTIC ACTIVITY: Deoxynucleoside triphosphate + DNA(n) =
CC diphosphate + DNA(n+1).
CC -!- SIMILARITY: Belongs to the DNA polymerase type-B family.
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DR EMBL; AY714813; AAU88096.1; -; Genomic_DNA.
DR RefSeq; YP_164473.1; NC_006560.1.
DR ProteinModelPortal; Q5Y0S2; -.
DR GeneID; 3190304; -.
DR ProtClustDB; CLSP2511265; -.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0004523; F:ribonuclease H activity; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR Gene3D; 3.90.1600.10; -; 2.
DR InterPro; IPR006172; DNA-dir_DNA_pol_B.
DR InterPro; IPR017964; DNA-dir_DNA_pol_B_CS.
DR InterPro; IPR006133; DNA-dir_DNA_pol_B_exonuc.
DR InterPro; IPR006134; DNA-dir_DNA_pol_B_multi_dom.
DR InterPro; IPR023211; DNA_pol_palm_dom.
DR InterPro; IPR021639; DNAPolymera_Pol_C.
DR InterPro; IPR012337; RNaseH-like_dom.
DR Pfam; PF00136; DNA_pol_B; 1.
DR Pfam; PF03104; DNA_pol_B_exo1; 1.
DR Pfam; PF11590; DNAPolymera_Pol; 1.
DR PRINTS; PR00106; DNAPOLB.
DR SMART; SM00486; POLBc; 1.
DR SUPFAM; SSF53098; RNaseH_fold; 1.
DR PROSITE; PS00116; DNA_POLYMERASE_B; 1.
PE 3: Inferred from homology;
KW DNA replication; DNA-binding; DNA-directed DNA polymerase;
KW Nucleotidyltransferase; Transferase.
SQ SEQUENCE 1226 AA; 134717 MW; 8B7E7B5A0BF908DA CRC64;
MGSVGHGGPA AGSAARAAAG FFGPPAGRGS APPPRPRENF YNPYLAAERR SAAAGRGAQP
APHSYCSDCD EFRFVAPRVL DEDAAPEMRV GVHDGRLRRA PRVYCGGEER DVLDFDRDAF
WPRRTRLWAG VDRAPAGATP AVDLFHVYDI VENVEHAQHG GGAWRAHGRF LDAITPSGTV
ITLLGLTPDG RRVAVHVYGT RQYFYMNRAE VDRRLGCRAP RDLCERMAAA LRESPGGSFR
NVSADHFEVD VVDRADVYYY ETPRVPYYRV YARNGRALAY LCDNFCPEIR KYEGGVDATT
RFVLDNPGFV TFGWYRLGRG RDGAPPHPRP TAAFVTSSDV EIDCTADNLT VERGRGDLPG
YKLMCFDIEC KAGGEDEAAF PVAANAEDLV IQISCLLYDL AAARLEHILL FSLGSCDLPE
AFVQDLGARG LPAPTVLEFD SEFEMLLAFV TFVKQYGPEF ATGYNIINFD WPFLIAKLTD
VYKVPLDGYG RMNRRGVFRV WDIGQSHFQK RSKIKMNGVV NIDMYGIVCD KVKLSSYKLN
AVAEAVLKDK KKDLSYRDIP RYYAAGPAQR GVIGEYCVQD SLLVGQLFFK FLPHLELSAV
ARLAGITLTR TIYDGQQIRV YTCLLRLAGQ KGFLLPDNRG RFRAAAGDDG GGGPEDATAG
GGGEDGDDAD GAAALAREGS GGRHVGYQGA KVLDPTSGFH VDPVVVFDFA SLYPSIIQAH
NLCFSTLSLG ADAVAGLEPG RDYLDIEVGG RRLFFVKAHV RESLLSILLR DWLAMRKEIR
SRIPQSTPEE AVLLDKQQAA IKVVCNSVYG FTGVQHGLLP CLHVAATVTT IGRDMLLATR
EYVHARWATF ERLRADFPEA AAMRAPGPYS MRIIYGDTDS IFVLSRGLTA EGLTAMGDRM
AAHISRALFL PPIKLECEKT FTKLLLIAKK KYIGVVCGGK MLIKGVDLVR KNNCAFINRT
SRALVDLLFY DDAVSAAAAA LAARPPEEWL AHPLPAGLDA FGRVLVDAHR RITDPDRDVR
DFVLTSELSR HPRAYANKRL PHLTVYYKLL ARRDQVPSIK DRIPYVIVAQ TREVEETVAR
IDALRELDAA PAAPPAPEPP PPPTGAPAPP KRPRGQQPGD PEPKRRRLLI SELAEDPGHA
VAHGVPLNTD YYFSHLIGAA CVTFKALFGN NAKITENLLK RFIPEVWHPE EETAVRLRSA
GFRAAGAGVT EAETRQRLRT AFDTLA
//