ID Q5YRF2_NOCFA Unreviewed; 311 AA.
AC Q5YRF2;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 27-MAR-2024, entry version 118.
DE SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:BAD59239.1};
GN OrderedLocusNames=NFA_43900 {ECO:0000313|EMBL:BAD59239.1};
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Nocardia.
OX NCBI_TaxID=247156 {ECO:0000313|EMBL:BAD59239.1, ECO:0000313|Proteomes:UP000006820};
RN [1] {ECO:0000313|EMBL:BAD59239.1, ECO:0000313|Proteomes:UP000006820}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152 {ECO:0000313|EMBL:BAD59239.1,
RC ECO:0000313|Proteomes:UP000006820};
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; AP006618; BAD59239.1; -; Genomic_DNA.
DR RefSeq; WP_011210924.1; NC_006361.1.
DR AlphaFoldDB; Q5YRF2; -.
DR STRING; 247156.NFA_43900; -.
DR GeneID; 61135012; -.
DR KEGG; nfa:NFA_43900; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_6_1_11; -.
DR OrthoDB; 9808620at2; -.
DR Proteomes; UP000006820; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF39; RUBISCO TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006820};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..65
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 311 AA; 32520 MW; 53E139D9F881DB1E CRC64;
MTLPPGTPDL AVLDLLVSVA DTGSLGAAAR RHGISQPAAS MRISALERRL RLRLLDRGPT
GSVLTEAGQV AVEQAREVLA AARSFTDTLT ALSADHAPRV RVASSKTIAD HRVPQWLAAL
RAVRPDVTVA LEVGNSRQVE AMVRDGSADI GFVEGPHPPV GLADRVLGAD HLLVIVGPEH
PWARRARPLG LRELAATPLL WREPGSGTRD TVWEILAAHC RPAPPAAELG SAVAILEAVR
TGLAPAVLSA LIAAPELAAG RVVEVPVADA AVLTRRFRAI WRREAPPSGA AETLAACAAR
IESARTAADP G
//
