GenomeNet

Database: UniProt
Entry: Q5YS66_NOCFA
LinkDB: Q5YS66_NOCFA
Original site: Q5YS66_NOCFA 
ID   Q5YS66_NOCFA            Unreviewed;       105 AA.
AC   Q5YS66;
DT   23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT   23-NOV-2004, sequence version 1.
DT   27-MAR-2024, entry version 70.
DE   RecName: Full=Lipopolysaccharide assembly protein A domain-containing protein {ECO:0000259|Pfam:PF06305};
GN   OrderedLocusNames=NFA_41260 {ECO:0000313|EMBL:BAD58975.1};
OS   Nocardia farcinica (strain IFM 10152).
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC   Nocardia.
OX   NCBI_TaxID=247156 {ECO:0000313|EMBL:BAD58975.1, ECO:0000313|Proteomes:UP000006820};
RN   [1] {ECO:0000313|EMBL:BAD58975.1, ECO:0000313|Proteomes:UP000006820}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IFM 10152 {ECO:0000313|EMBL:BAD58975.1,
RC   ECO:0000313|Proteomes:UP000006820};
RX   PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA   Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA   Shiba T., Hattori M.;
RT   "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL   Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AP006618; BAD58975.1; -; Genomic_DNA.
DR   RefSeq; WP_011210660.1; NC_006361.1.
DR   AlphaFoldDB; Q5YS66; -.
DR   STRING; 247156.NFA_41260; -.
DR   GeneID; 61134766; -.
DR   KEGG; nfa:NFA_41260; -.
DR   eggNOG; COG5416; Bacteria.
DR   HOGENOM; CLU_134414_2_0_11; -.
DR   OrthoDB; 4427099at2; -.
DR   Proteomes; UP000006820; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR010445; LapA_dom.
DR   Pfam; PF06305; LapA_dom; 1.
PE   4: Predicted;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006820};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        34..54
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        74..97
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          55..104
FT                   /note="Lipopolysaccharide assembly protein A"
FT                   /evidence="ECO:0000259|Pfam:PF06305"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   105 AA;  11261 MW;  1FE402C8C12CD5A0 CRC64;
     MAANPEYDPD ASGRDVPPVV GETTTRSISS KTGYTWVGLV AGTLILVVLL IFILQNLDTV
     EVQLFFWEFN LPLGVAVLLS VIGGALVMAL VGGVRILQLR RAAKH
//
DBGET integrated database retrieval system