ID Q5YXU3_NOCFA Unreviewed; 305 AA.
AC Q5YXU3;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 24-JAN-2024, entry version 110.
DE SubName: Full=Putative transcriptional regulator {ECO:0000313|EMBL:BAD56998.1};
GN OrderedLocusNames=NFA_21520 {ECO:0000313|EMBL:BAD56998.1};
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Nocardia.
OX NCBI_TaxID=247156 {ECO:0000313|EMBL:BAD56998.1, ECO:0000313|Proteomes:UP000006820};
RN [1] {ECO:0000313|EMBL:BAD56998.1, ECO:0000313|Proteomes:UP000006820}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152 {ECO:0000313|EMBL:BAD56998.1,
RC ECO:0000313|Proteomes:UP000006820};
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; AP006618; BAD56998.1; -; Genomic_DNA.
DR RefSeq; WP_011208683.1; NC_006361.1.
DR AlphaFoldDB; Q5YXU3; -.
DR STRING; 247156.NFA_21520; -.
DR GeneID; 61132913; -.
DR KEGG; nfa:NFA_21520; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_6_4_11; -.
DR OMA; WACDPRP; -.
DR OrthoDB; 3176554at2; -.
DR Proteomes; UP000006820; Chromosome.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08414; PBP2_LTTR_aromatics_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30346:SF0; HCA OPERON TRANSCRIPTIONAL ACTIVATOR HCAR; 1.
DR PANTHER; PTHR30346; TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Reference proteome {ECO:0000313|Proteomes:UP000006820}.
FT DOMAIN 4..61
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 305 AA; 33376 MW; 61BE37960EC82051 CRC64;
MVDLNLRLVS YLVTVLDEGH FGRAAQRLYI STPALSQQIR KLEQKLGVEL IDRSAHPLQP
TPAGRRFLPE ARAALAAAQR AVGAVRAEGE TLRIGFMTAA LATRTRPLLD LVRRESGVAT
IELVELGWAE QASAVRDGKV DASLMRPPVA DAGGLRLDVL CKEPRVVALP VAHRLADRDS
ISVDELDGEP HLTDREADRE WVRWWACDPR PSGRPVVYGP SVRTIDELLE VVATGVAISI
TSKFVQDTHR HPDVVFVPVR DVEPASLCLC TRAEDSSPLI EALRDAARRI AEFDLDTAAS
TGAQR
//