ID Q5YYB3_NOCFA Unreviewed; 379 AA.
AC Q5YYB3;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 27-MAR-2024, entry version 94.
DE SubName: Full=Putative lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:BAD56828.1};
GN OrderedLocusNames=NFA_19820 {ECO:0000313|EMBL:BAD56828.1};
OS Nocardia farcinica (strain IFM 10152).
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Nocardiaceae;
OC Nocardia.
OX NCBI_TaxID=247156 {ECO:0000313|EMBL:BAD56828.1, ECO:0000313|Proteomes:UP000006820};
RN [1] {ECO:0000313|EMBL:BAD56828.1, ECO:0000313|Proteomes:UP000006820}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IFM 10152 {ECO:0000313|EMBL:BAD56828.1,
RC ECO:0000313|Proteomes:UP000006820};
RX PubMed=15466710; DOI=10.1073/pnas.0406410101;
RA Ishikawa J., Yamashita A., Mikami Y., Hoshino Y., Kurita H., Hotta K.,
RA Shiba T., Hattori M.;
RT "The complete genomic sequence of Nocardia farcinica IFM 10152.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:14925-14930(2004).
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- SIMILARITY: Belongs to the DegT/DnrJ/EryC1 family.
CC {ECO:0000256|RuleBase:RU004508}.
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DR EMBL; AP006618; BAD56828.1; -; Genomic_DNA.
DR RefSeq; WP_011208513.1; NC_006361.1.
DR AlphaFoldDB; Q5YYB3; -.
DR STRING; 247156.NFA_19820; -.
DR GeneID; 61132760; -.
DR KEGG; nfa:NFA_19820; -.
DR eggNOG; COG0399; Bacteria.
DR HOGENOM; CLU_033332_0_2_11; -.
DR OrthoDB; 9804264at2; -.
DR Proteomes; UP000006820; Chromosome.
DR CDD; cd00616; AHBA_syn; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR000653; DegT/StrS_aminotransferase.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR PANTHER; PTHR30244:SF34; DTDP-4-AMINO-4,6-DIDEOXYGALACTOSE TRANSAMINASE; 1.
DR PANTHER; PTHR30244; TRANSAMINASE; 1.
DR Pfam; PF01041; DegT_DnrJ_EryC1; 1.
DR PIRSF; PIRSF000390; PLP_StrS; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
PE 3: Inferred from homology;
KW Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR000390-2,
KW ECO:0000256|RuleBase:RU004508};
KW Reference proteome {ECO:0000313|Proteomes:UP000006820}.
FT ACT_SITE 185
FT /note="Proton acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR000390-1"
FT MOD_RES 185
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR000390-2"
SQ SEQUENCE 379 AA; 40656 MW; 33EF1D29419D62E4 CRC64;
MSTDRVIFSR PYRARRELAN LAAVLASDHS HGDGPFTASA TAKLQAITEA PHALLTTSCT
SALEMAGLLL ELGPEDEVIV PSFAFTSTAT SMALRGATCV FADIDPATGN LDPESVAAAI
GPRTKAVVVI HYGGVAADMA GLLELAATHG FAIVEDNAHG LGGRWRGRPL GTIGTLGTLS
FHDTKNVHCG EGGALLLTDD ILMGRAEIIR EKGTDRARFL RGAVDKYSWQ DIGSSYLPSE
LNAAVLDAQL DEFDRIQAGR HRVWNAYAAG LPDWAARNDV RLMSVPADRE HTAHLFYLRT
PTEQRRDDLI AHLAARGISA PFHYVPLDSS PAGLKLGRTP YPCVRSAEFS GTVVRLPLWP
DLADAQVERV IEAVTAFTV
//
