ID Q5ZHL1_CHICK Unreviewed; 359 AA.
AC Q5ZHL1;
DT 23-NOV-2004, integrated into UniProtKB/TrEMBL.
DT 23-NOV-2004, sequence version 1.
DT 27-MAR-2024, entry version 113.
DE RecName: Full=AAA+ ATPase domain-containing protein {ECO:0000259|SMART:SM00382};
GN ORFNames=RCJMB04_37a17 {ECO:0000313|EMBL:CAG32782.1};
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031 {ECO:0000313|EMBL:CAG32782.1};
RN [1] {ECO:0000313|EMBL:CAG32782.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CB {ECO:0000313|EMBL:CAG32782.1};
RC TISSUE=Bursa {ECO:0000313|EMBL:CAG32782.1};
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- SIMILARITY: Belongs to the activator 1 small subunits family.
CC {ECO:0000256|ARBA:ARBA00005378}.
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DR EMBL; AJ721123; CAG32782.1; -; mRNA.
DR RefSeq; NP_001006550.1; NM_001006550.2.
DR AlphaFoldDB; Q5ZHL1; -.
DR GeneID; 424958; -.
DR KEGG; gga:424958; -.
DR CTD; 5984; -.
DR VEuPathDB; HostDB:geneid_424958; -.
DR OrthoDB; 275853at2759; -.
DR PhylomeDB; Q5ZHL1; -.
DR Reactome; R-GGA-265976; Homologous DNA pairing and strand exchange.
DR Reactome; R-GGA-351451; Homologous recombination repair of replication-dependent double-strand breaks.
DR Reactome; R-GGA-351468; Processing of DNA double-strand break ends.
DR Reactome; R-GGA-353303; Nucleotide Excision Repair.
DR GO; GO:0005654; C:nucleoplasm; TAS:Reactome.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd18140; HLD_clamp_RFC; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.272.10; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013748; Rep_factorC_C.
DR InterPro; IPR047854; RFC_lid.
DR PANTHER; PTHR11669; REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; 1.
DR PANTHER; PTHR11669:SF20; REPLICATION FACTOR C SUBUNIT 4; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF08542; Rep_fac_C; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
PE 2: Evidence at transcript level;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 68..200
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT REGION 1..35
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 359 AA; 39323 MW; A2F635D887AA8C2E CRC64;
MQAFLKGPSS ISSKPPAAKE RSAAGSSGEG NKLKPVPWVE KYRPKNVDEV AFQDEVVAVL
KKSLEGADLP NLLFYGPPGT GKTSTILAAA RELFGPELFR QRVLELNASD ERGIQVIREK
VKAFAQLTAS GSRADGKVCP PFKIVILDEA DSMTSAAQGA LRRTMEKESK TTRFCLICNY
ISRIIEPLTS RCSKFRFKPL SDKIQQQRLL DVSEKENVKI TSEAVSYLVK VSDGDLRKAI
TYLQSATRLM GGKEITEKTV TEIAGVIPRE TIDGLLSACS SGSFEKLETV AKNLINEGYA
VAQLVNQLHD IVVESEDFSD KQKSIIVEKL AEVDKCLADG ADEYLQLISL CALVMQQLT
//
