ID Q68WX2_RICTY Unreviewed; 454 AA.
AC Q68WX2;
DT 11-OCT-2004, integrated into UniProtKB/TrEMBL.
DT 11-OCT-2004, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE RecName: Full=LysM domain-containing protein {ECO:0000259|PROSITE:PS51782};
GN OrderedLocusNames=RT0393 {ECO:0000313|EMBL:AAU03870.1};
OS Rickettsia typhi (strain ATCC VR-144 / Wilmington).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales;
OC Rickettsiaceae; Rickettsieae; Rickettsia; typhus group.
OX NCBI_TaxID=257363 {ECO:0000313|EMBL:AAU03870.1, ECO:0000313|Proteomes:UP000000604};
RN [1] {ECO:0000313|EMBL:AAU03870.1, ECO:0000313|Proteomes:UP000000604}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC VR-144 / Wilmington {ECO:0000313|Proteomes:UP000000604};
RX PubMed=15317790; DOI=10.1128/JB.186.17.5842-5855.2004;
RA McLeod M.P., Qin X., Karpathy S.E., Gioia J., Highlander S.K., Fox G.E.,
RA McNeill T.Z., Jiang H., Muzny D., Jacob L.S., Hawes A.C., Sodergren E.,
RA Gill R., Hume J., Morgan M., Fan G., Amin A.G., Gibbs R.A., Hong C.,
RA Yu X.-J., Walker D.H., Weinstock G.M.;
RT "Complete genome sequence of Rickettsia typhi and comparison with sequences
RT of other Rickettsiae.";
RL J. Bacteriol. 186:5842-5855(2004).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
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DR EMBL; AE017197; AAU03870.1; -; Genomic_DNA.
DR RefSeq; WP_011190854.1; NC_006142.1.
DR AlphaFoldDB; Q68WX2; -.
DR KEGG; rty:RT0393; -.
DR eggNOG; COG0739; Bacteria.
DR HOGENOM; CLU_026846_4_0_5; -.
DR OrthoDB; 9805070at2; -.
DR Proteomes; UP000000604; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR CDD; cd12797; M23_peptidase; 1.
DR Gene3D; 3.10.450.350; -; 2.
DR Gene3D; 2.70.70.10; Glucose Permease (Domain IIA); 1.
DR InterPro; IPR045834; Csd3_N2.
DR InterPro; IPR011055; Dup_hybrid_motif.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR016047; Peptidase_M23.
DR PANTHER; PTHR21666:SF270; OUTER MEMBRANE ANTIGENIC LIPOPROTEIN B; 1.
DR PANTHER; PTHR21666; PEPTIDASE-RELATED; 1.
DR Pfam; PF19425; Csd3_N2; 1.
DR Pfam; PF01551; Peptidase_M23; 1.
DR SUPFAM; SSF51261; Duplicated hybrid motif; 1.
DR PROSITE; PS51782; LYSM; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 23..46
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 72..120
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
SQ SEQUENCE 454 AA; 50742 MW; 73EAF8EAC7461036 CRC64;
MNDTILYGFN VQSSFISARL KKIFTPAFFL SLLLFIGLVF FVSFAINNYV NDTLSITLVQ
PDSSEEETIS FKEVVVKKGD TIKSILVEQK IPKNDIEKII NLVKAGQLSS TLKIGQQITF
EYETKITEND DEDLTSEITF LNKIIIIIDK LKTVEVIREG DNFKVEEIVV PLSKKVSKSS
VNIESNFMSA LKKLGLSNNS IIELINAYAY QIDFQRQIKN GDTATVITEK YITEDGKFSH
HGKILYVSLN LSGKEYNIYR YSHDNNANNY AFFSEDGKSV KRSLLKTPLK VIKVSSHYGN
RKHPILGYTK MHRGVDFAAP TGTPIYSAGN GVITEIGWKS GYGKFIQVKH SGTLSTAYAH
ASSFAKNLKV GSIVKQGQVI AYVGSTGRAS GPHLHYEVKI DGKHVNPMSV KTTPGIELNG
KNLEKFKQFK QEIKTLNVKL DKESYTDEIN TVSL
//
