ID Q6FS73_CANGA Unreviewed; 610 AA.
AC Q6FS73;
DT 19-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 19-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 128.
DE SubName: Full=Candida glabrata strain CBS138 chromosome H complete sequence {ECO:0000313|EMBL:CAG59854.1};
GN OrderedLocusNames=CAGL0H02937g {ECO:0000313|CGD:CAL0130575,
GN ECO:0000313|EMBL:CAG59854.1};
OS Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 /
OS NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Nakaseomyces.
OX NCBI_TaxID=284593 {ECO:0000313|EMBL:CAG59854.1, ECO:0000313|Proteomes:UP000002428};
RN [1] {ECO:0000313|EMBL:CAG59854.1, ECO:0000313|Proteomes:UP000002428}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65
RC {ECO:0000313|Proteomes:UP000002428};
RX PubMed=15229592; DOI=10.1038/nature02579;
RG Genolevures;
RA Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I.,
RA de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L.,
RA Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.,
RA Beckerich J.M., Beyne E., Bleykasten C., Boisrame A., Boyer J.,
RA Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E.,
RA Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C.,
RA Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M.,
RA Lesur I., Ma L., Muller H., Nicaud J.M., Nikolski M., Oztas S.,
RA Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.F., Straub M.L.,
RA Suleau A., Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E.,
RA Wirth B., Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A.,
RA Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
RA Wincker P., Souciet J.L.;
RT "Genome evolution in yeasts.";
RL Nature 430:35-44(2004).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- SIMILARITY: Belongs to the WD repeat UTP18 family.
CC {ECO:0000256|ARBA:ARBA00025767}.
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DR EMBL; CR380954; CAG59854.1; -; Genomic_DNA.
DR RefSeq; XP_446921.1; XM_446921.1.
DR AlphaFoldDB; Q6FS73; -.
DR STRING; 284593.Q6FS73; -.
DR EnsemblFungi; CAGL0H02937g-T; CAGL0H02937g-T-p1; CAGL0H02937g.
DR GeneID; 2888885; -.
DR KEGG; cgr:CAGL0H02937g; -.
DR CGD; CAL0130575; CAGL0H02937g.
DR VEuPathDB; FungiDB:CAGL0H02937g; -.
DR eggNOG; KOG2055; Eukaryota.
DR HOGENOM; CLU_011055_1_0_1; -.
DR InParanoid; Q6FS73; -.
DR OMA; DLNRATY; -.
DR Proteomes; UP000002428; Chromosome H.
DR GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IEA:EnsemblFungi.
DR GO; GO:0032040; C:small-subunit processome; IEA:EnsemblFungi.
DR GO; GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:EnsemblFungi.
DR GO; GO:0000292; P:RNA fragment catabolic process; IEA:EnsemblFungi.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045161; Utp18.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR18359:SF0; U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG; 1.
DR PANTHER; PTHR18359; WD-REPEAT PROTEIN-RELATED; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 4.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000002428};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 243..277
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 580..610
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 47..129
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..124
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 610 AA; 67692 MW; 7B3880D9ED9FDA97 CRC64;
MSKSAVDMKQ VPPPDEEEEL LAKLVFGDTT DFHSGLADFD TEFALNEEKK LNEEDNIADG
ESSSGSGEDE EGDAMEQLAD DQLFYVDDGE GDGEEMDVDD NGDSASDNDE GMTSDEEEEQ
AWVDSDDEKL SVPITSNNRT KKLRQNYQDS HISGADYVRR LRAQFEKIYP RPQWADSISD
SEGDLSDGDY DSNSEQLNSV INGDVNALSK ILESTFTYRD NITTKLLPEK SLDILRLKDA
NASHASHSAI QSLSFHPSKP LLLSGGYDRT LRLYHIDGKS NPLVTSVYLK GTPVQTCCFY
VSHNNTSSKL PQEQKIYTGG RRRYMHSWDL SASFNNARSE KAASVAKIDK FSRMYGHEET
QRSFEKFKVG YLYNFTTNSS QGIVVLQGGS GWINIIDANS GVWITGCKIE GNLVDFCIDY
QPISKGRFQT ILIVTNTYGE IWEFNLSKNN EIIRRWKDNG GIGITTIQVG GGTSSDHLLP
MSSRKIRQNR WLAIGSESGF VNVYDRSAIR SNADLKNAAI SPIATLDQLT TSISSLNFSP
DGQILCMSSR AIKDALRLVH LPSGKVFSNW PTSGTPLGKV TSVAISSNGE MLAVGNEQGK
IRLWRLNFYQ
//
