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Database: UniProt
Entry: Q6KCR4_9TOMB
LinkDB: Q6KCR4_9TOMB
Original site: Q6KCR4_9TOMB 
ID   Q6KCR4_9TOMB            Unreviewed;       389 AA.
AC   Q6KCR4;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   13-SEP-2023, entry version 38.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
DE   AltName: Full=Coat protein {ECO:0000256|ARBA:ARBA00031336};
DE   AltName: Full=p41 {ECO:0000256|ARBA:ARBA00031782};
GN   Name=cp {ECO:0000313|EMBL:CAE55154.1};
OS   Neckar River virus.
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus;
OC   Tombusvirus neckarfluminis.
OX   NCBI_TaxID=255520 {ECO:0000313|EMBL:CAE55154.1, ECO:0000313|Proteomes:UP000243550};
RN   [1] {ECO:0000313|EMBL:CAE55154.1, ECO:0000313|Proteomes:UP000243550}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Heinze C., Zhang D., Lesemann D.E., Willingmann P., Adam G.;
RT   "The coat sequence of the Nekar River Tombusvirus.";
RL   Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC       with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC       capsid proteins. {ECO:0000256|ARBA:ARBA00002495}.
CC   -!- SUBUNIT: Homomultimer. {ECO:0000256|ARBA:ARBA00011553}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; AJ607403; CAE55154.1; -; Genomic_RNA.
DR   OrthoDB; 10131at10239; -.
DR   Proteomes; UP000243550; Genome.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:CAE55154.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          77..268
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
SQ   SEQUENCE   389 AA;  41449 MW;  B154971E33644F5E CRC64;
     MTMVVRNNNN ALALSKKQLA GMAATAAATA LKAYAVSNRD AIVDTAVNLG KKSVKAVRNR
     YNQRNNQMVS HVGGMGGAIM APVAVSRQLN GRRPKFSGTT AGSVTITHRE YLTQVNNSTS
     FSVNGGVTGN LYQLNPLNGN LFSWLPSIAA NFDQYSFNRV AVQYVPMCGT TEVGRVGIYW
     DKDSTDPEPS DRVELANYPV LKETPPWGET VLNIPVDRIK RFCDDSSTQD HKLIDLGQLG
     FATYGGSTTN ACGDLFITYS VTLFAPQPPS TLIETLQTDA ADVLFNRAGP NYAIISKTAT
     TITLTFRSTG IFLVDIMYVS TGATTLNTSG GASFTEQTTI DAIGAATAST ALVTVASLPG
     TISWVNLTNG AATVHITRAA RRNTPLIVA
//
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