ID Q6KCR4_9TOMB Unreviewed; 389 AA.
AC Q6KCR4;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 13-SEP-2023, entry version 38.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
DE AltName: Full=Coat protein {ECO:0000256|ARBA:ARBA00031336};
DE AltName: Full=p41 {ECO:0000256|ARBA:ARBA00031782};
GN Name=cp {ECO:0000313|EMBL:CAE55154.1};
OS Neckar River virus.
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus;
OC Tombusvirus neckarfluminis.
OX NCBI_TaxID=255520 {ECO:0000313|EMBL:CAE55154.1, ECO:0000313|Proteomes:UP000243550};
RN [1] {ECO:0000313|EMBL:CAE55154.1, ECO:0000313|Proteomes:UP000243550}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Heinze C., Zhang D., Lesemann D.E., Willingmann P., Adam G.;
RT "The coat sequence of the Nekar River Tombusvirus.";
RL Submitted (NOV-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC capsid proteins. {ECO:0000256|ARBA:ARBA00002495}.
CC -!- SUBUNIT: Homomultimer. {ECO:0000256|ARBA:ARBA00011553}.
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; AJ607403; CAE55154.1; -; Genomic_RNA.
DR OrthoDB; 10131at10239; -.
DR Proteomes; UP000243550; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:CAE55154.1};
KW T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW Virion {ECO:0000256|ARBA:ARBA00023060}.
FT DOMAIN 77..268
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
SQ SEQUENCE 389 AA; 41449 MW; B154971E33644F5E CRC64;
MTMVVRNNNN ALALSKKQLA GMAATAAATA LKAYAVSNRD AIVDTAVNLG KKSVKAVRNR
YNQRNNQMVS HVGGMGGAIM APVAVSRQLN GRRPKFSGTT AGSVTITHRE YLTQVNNSTS
FSVNGGVTGN LYQLNPLNGN LFSWLPSIAA NFDQYSFNRV AVQYVPMCGT TEVGRVGIYW
DKDSTDPEPS DRVELANYPV LKETPPWGET VLNIPVDRIK RFCDDSSTQD HKLIDLGQLG
FATYGGSTTN ACGDLFITYS VTLFAPQPPS TLIETLQTDA ADVLFNRAGP NYAIISKTAT
TITLTFRSTG IFLVDIMYVS TGATTLNTSG GASFTEQTTI DAIGAATAST ALVTVASLPG
TISWVNLTNG AATVHITRAA RRNTPLIVA
//