ID Q6NMJ9_ARATH Unreviewed; 284 AA.
AC Q6NMJ9;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 134.
DE SubName: Full=At2g23840 {ECO:0000313|EMBL:AAS47666.1};
DE SubName: Full=HNH endonuclease {ECO:0000313|EMBL:AEC07498.1};
GN OrderedLocusNames=At2g23840 {ECO:0000313|EMBL:AEC07498.1};
GN ORFNames=T29E15.4 {ECO:0000313|EMBL:AEC07498.1}, T29E15_4
GN {ECO:0000313|EMBL:AEC07498.1};
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702 {ECO:0000313|EMBL:AAS47666.1};
RN [1] {ECO:0000313|EMBL:AEC07498.1, ECO:0000313|Proteomes:UP000006548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
RA Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2] {ECO:0000313|EMBL:AAR24724.1}
RP NUCLEOTIDE SEQUENCE.
RA Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.;
RT "Arabidopsis cDNA clones.";
RL Submitted (DEC-2003) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:AAS47666.1}
RP NUCLEOTIDE SEQUENCE.
RA Kim C.J., Chen H., Cheuk R., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:AEC07498.1}
RP NUCLEOTIDE SEQUENCE.
RG TAIR;
RA Swarbreck D., Lamesch P., Wilks C., Huala E.;
RL Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:AEC07498.1}
RP NUCLEOTIDE SEQUENCE.
RA Krishnakumar V., Cheng C.-Y., Chan A.P., Schobel S., Kim M., Ferlanti E.S.,
RA Belyaeva I., Rosen B.D., Micklem G., Miller J.R., Vaughn M., Town C.D.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [6] {ECO:0000313|Proteomes:UP000006548}
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
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DR EMBL; BT010946; AAR24724.1; -; mRNA.
DR EMBL; BT011660; AAS47666.1; -; mRNA.
DR EMBL; CP002685; AEC07498.1; -; Genomic_DNA.
DR RefSeq; NP_179964.2; NM_127947.4.
DR AlphaFoldDB; Q6NMJ9; -.
DR STRING; 3702.Q6NMJ9; -.
DR PaxDb; 3702-AT2G23840-1; -.
DR ProteomicsDB; 177498; -.
DR EnsemblPlants; AT2G23840.1; AT2G23840.1; AT2G23840.
DR GeneID; 816916; -.
DR Gramene; AT2G23840.1; AT2G23840.1; AT2G23840.
DR KEGG; ath:AT2G23840; -.
DR TAIR; AT2G23840; -.
DR eggNOG; ENOG502QQI3; Eukaryota.
DR HOGENOM; CLU_085518_0_0_1; -.
DR OMA; VWLQYLA; -.
DR OrthoDB; 103349at2759; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q6NMJ9; baseline and differential.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
DR CDD; cd00085; HNHc; 1.
DR Gene3D; 1.10.30.50; -; 1.
DR InterPro; IPR029471; HNH_5.
DR InterPro; IPR003615; HNH_nuc.
DR PANTHER; PTHR33877:SF2; HNH NUCLEASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR33877; SLL1193 PROTEIN; 1.
DR Pfam; PF14279; HNH_5; 1.
DR SMART; SM00507; HNHc; 1.
PE 1: Evidence at protein level;
KW Endonuclease {ECO:0000313|EMBL:AEC07498.1};
KW Hydrolase {ECO:0000313|EMBL:AEC07498.1};
KW Nuclease {ECO:0000313|EMBL:AEC07498.1};
KW Proteomics identification {ECO:0007829|PeptideAtlas:Q6NMJ9,
KW ECO:0007829|ProteomicsDB:Q6NMJ9};
KW Reference proteome {ECO:0000313|Proteomes:UP000006548}.
FT DOMAIN 174..224
FT /note="HNH nuclease"
FT /evidence="ECO:0000259|SMART:SM00507"
SQ SEQUENCE 284 AA; 32723 MW; 002E32433BBB7818 CRC64;
MAHFSARLKL LSSNDGLSFG VDSRDQFRQS LYMAGGGSPL VPIRMSRLKF CARIFSSYSF
PYKRKKIRDL DNTEKNLDID EDNDEWDFDG DDDGLETDDH LSCFRGLVLD ISYRPVNVVC
WKRAICLEYM DKADVLEYYD QTVSSPTGSF YIPAVLRVPH LLQVVKRRRV KNSLSRKNIL
LRDDYTCQYC SSRENLTIDH VMPVSRGGEW TWQNLVAACS RCNSRKGQKT ADEAHMKLLK
VPKEPKDYDI VAIPLTNAAI RMLRSNKGMP EEWRQYLAKP LSET
//
