ID Q6V8M0_RHOMR Unreviewed; 165 AA.
AC Q6V8M0;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 77.
DE SubName: Full=Xylanase {ECO:0000313|EMBL:AAR06926.1};
DE Flags: Fragment;
GN Name=xyn10A {ECO:0000313|EMBL:AAR06926.1};
OS Rhodothermus marinus (Rhodothermus obamensis).
OC Bacteria; Rhodothermota; Rhodothermia; Rhodothermales; Rhodothermaceae;
OC Rhodothermus.
OX NCBI_TaxID=29549 {ECO:0000313|EMBL:AAR06926.1};
RN [1] {ECO:0000313|EMBL:AAR06926.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=15082834; DOI=10.1093/protein/gzh026;
RA Cicortas Gunnarsson L., Nordberg Karlsson E., Albrekt A.S., Andersson M.,
RA Holst O., Ohlin M.;
RT "A carbohydrate binding module as a diversity-carrying scaffold.";
RL Protein Eng. Des. Sel. 17:213-221(2004).
RN [2] {ECO:0007829|PDB:4BJ0}
RP X-RAY CRYSTALLOGRAPHY (1.00 ANGSTROMS) IN COMPLEX WITH CALCIUM.
RX PubMed=25302425; DOI=10.1002/PROT.24700;
RA von Schantz L., Hakansson M., Logan D.T., Nordberg-Karlsson E., Ohlin M.;
RT "Carbohydrate binding module recognition of xyloglucan defined by polar
RT contacts with branching xyloses and CH- interactions.";
RL Proteins 82:3466-3475(2014).
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DR EMBL; AY347870; AAR06926.1; -; Genomic_DNA.
DR PDB; 4BJ0; X-ray; 1.00 A; A=1-165.
DR PDBsum; 4BJ0; -.
DR AlphaFoldDB; Q6V8M0; -.
DR SMR; Q6V8M0; -.
DR GO; GO:0016798; F:hydrolase activity, acting on glycosyl bonds; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0045493; P:xylan catabolic process; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR InterPro; IPR003305; CenC_carb-bd.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR Pfam; PF02018; CBM_4_9; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
PE 1: Evidence at protein level;
KW 3D-structure {ECO:0007829|PDB:4BJ0}; Calcium {ECO:0007829|PDB:4BJ0};
KW Carbohydrate metabolism {ECO:0000313|EMBL:AAR06926.1};
KW Glycosidase {ECO:0000313|EMBL:AAR06926.1};
KW Hydrolase {ECO:0000313|EMBL:AAR06926.1};
KW Metal-binding {ECO:0007829|PDB:4BJ0};
KW Polysaccharide degradation {ECO:0000313|EMBL:AAR06926.1};
KW Xylan degradation {ECO:0000313|EMBL:AAR06926.1}.
FT DOMAIN 5..136
FT /note="CBM-cenC"
FT /evidence="ECO:0000259|Pfam:PF02018"
FT BINDING 8
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0007829|PDB:4BJ0"
FT BINDING 10
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0007829|PDB:4BJ0"
FT BINDING 51
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0007829|PDB:4BJ0"
FT BINDING 54
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0007829|PDB:4BJ0"
FT BINDING 159
FT /ligand="Ca(2+)"
FT /ligand_id="ChEBI:CHEBI:29108"
FT /evidence="ECO:0007829|PDB:4BJ0"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AAR06926.1"
FT NON_TER 165
FT /evidence="ECO:0000313|EMBL:AAR06926.1"
SQ SEQUENCE 165 AA; 17797 MW; 7E7F774F7B7806AF CRC64;
LVANINGGFE STPAGVVTDL AEGVEGWDLN VGSSVTNPPV FEVLETSDAP EGNKVLAVTV
NGVGNNPWDI EATAFPVNVR PGVTYTYTIW ARAEQDGAVV SFTVGNQSFQ EYGRLHEQQI
TTEWQPFTFE FTVSDQETVI RAPIHFGYAA NVGNTIYIDG LAIVD
//
