ID Q6YR40_ONYPE Unreviewed; 562 AA.
AC Q6YR40;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 99.
DE SubName: Full=Oligoendopeptidase F {ECO:0000313|EMBL:BAD04263.1};
GN OrderedLocusNames=PAM_178 {ECO:0000313|EMBL:BAD04263.1};
OS Onion yellows phytoplasma (strain OY-M).
OC Bacteria; Mycoplasmatota; Mollicutes; Acholeplasmatales;
OC Acholeplasmataceae; Phytoplasma; 16SrI (Aster yellows group).
OX NCBI_TaxID=262768 {ECO:0000313|EMBL:BAD04263.1, ECO:0000313|Proteomes:UP000002523};
RN [1] {ECO:0000313|EMBL:BAD04263.1, ECO:0000313|Proteomes:UP000002523}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OY-M {ECO:0000313|Proteomes:UP000002523};
RX PubMed=14661021; DOI=10.1038/ng1277;
RA Oshima K., Kakizawa S., Nishigawa H., Jung H.-Y., Wei W., Suzuki S.,
RA Arashida R., Nakata D., Miyata S., Ugaki M., Namba S.;
RT "Reductive evolution suggested from the complete genome sequence of a
RT plant-pathogenic phytoplasma.";
RL Nat. Genet. 36:27-29(2004).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|RuleBase:RU003435};
CC Note=Binds 1 zinc ion. {ECO:0000256|RuleBase:RU003435};
CC -!- SIMILARITY: Belongs to the peptidase M3 family.
CC {ECO:0000256|RuleBase:RU003435}.
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DR EMBL; AP006628; BAD04263.1; -; Genomic_DNA.
DR AlphaFoldDB; Q6YR40; -.
DR STRING; 262768.PAM_178; -.
DR MEROPS; M03.010; -.
DR KEGG; poy:PAM_178; -.
DR eggNOG; COG1164; Bacteria.
DR HOGENOM; CLU_030403_1_0_14; -.
DR BioCyc; OYEL262768:G1G26-218-MONOMER; -.
DR Proteomes; UP000002523; Chromosome.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd09606; M3B_PepF; 1.
DR Gene3D; 1.10.1370.30; -; 1.
DR InterPro; IPR045090; Pept_M3A_M3B.
DR InterPro; IPR001567; Pept_M3A_M3B_dom.
DR InterPro; IPR011976; Pept_M3B_oligopep-rel.
DR NCBIfam; TIGR02289; M3_not_pepF; 1.
DR PANTHER; PTHR11804:SF28; OLIGOENDOPEPTIDASE F; 1.
DR PANTHER; PTHR11804; PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED; 1.
DR Pfam; PF01432; Peptidase_M3; 1.
DR SUPFAM; SSF55486; Metalloproteases ('zincins'), catalytic domain; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU003435};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU003435};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049,
KW ECO:0000256|RuleBase:RU003435};
KW Protease {ECO:0000256|ARBA:ARBA00022670, ECO:0000256|RuleBase:RU003435};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU003435}.
FT DOMAIN 165..541
FT /note="Peptidase M3A/M3B catalytic"
FT /evidence="ECO:0000259|Pfam:PF01432"
SQ SEQUENCE 562 AA; 65948 MW; C58ED4BA2F11F417 CRC64;
MKFQDFEYQR VDIAQNKQTI LPMIEAFLDA SLPEQIKIIN RLNSLMDEIN SMFTLAEIRH
SLDVKDTFYQ QEKHFCDQNA PLLTELQHQF SQTMVKSKHY DALVQEFGPL LFDQTKLFLK
TFDPKIIPYL QEENTLTTKY QKLISDPSVA FEGKLYNLSQ MAPFLESSQR QTRKNAQLAV
SQFFAKNEQE YDLIYDQLVQ TRTKMAQILG YSNFVALGYD LLGRTDYDAN QIADYRTNIL
KYVLPFYTMT QKRKSKRLGI AKLESYDKSF NFSSGNPKPQ RGVDFQLTQA KKMYHAMSLQ
TKLFFDFLLE KNLLDLDSKP NKTGGGYCTY LPKYSAPFVF ANFNGTSHDV DVLTHEIGHA
FQVYQSRHLI PEYRWPTFEA AEISSMGMEF LAYPWVKDFF AQDVDKYQFL HLSQSLNFLL
YGALVDHFQH EVYQNPQMTP AQRKECWRNL EKKYLLLETY EGDPFLEKGT FWFRQSHIFS
TPFYYIDYTL AQVCALEIWL LSKQDYSNTW QKYLKLCQLG GSQTFLNLLK TTGLTNPFEP
NHLKNIVSFV TCYLQKIDDT KF
//
