GenomeNet

Database: UniProt
Entry: Q709N5_PENSV
LinkDB: Q709N5_PENSV
Original site: Q709N5_PENSV 
ID   Q709N5_PENSV            Unreviewed;       378 AA.
AC   Q709N5;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   13-SEP-2023, entry version 51.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
DE   AltName: Full=Coat protein {ECO:0000256|ARBA:ARBA00031336};
DE   AltName: Full=p41 {ECO:0000256|ARBA:ARBA00031782};
GN   Name=cp {ECO:0000313|EMBL:CAE55158.1};
OS   Pelargonium necrotic spot virus (PeNSV).
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Tombusvirus;
OC   Tombusvirus necropelargonii.
OX   NCBI_TaxID=255587 {ECO:0000313|EMBL:CAE55158.1, ECO:0000313|Proteomes:UP000202589};
OH   NCBI_TaxID=4032; Pelargonium zonale.
RN   [1] {ECO:0000313|Proteomes:UP000202589}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15290378; DOI=10.1007/s00705-004-0319-6;
RA   Heinze C., Wobbe V., Lesemann D.E., Zhang D.Y., Willingmann P., Adam G.;
RT   "Pelargonium necrotic spot virus: a new member of the genus Tombusvirus.";
RL   Arch. Virol. 149:1527-1539(2004).
CC   -!- FUNCTION: Capsid protein self-assembles to form an icosahedral capsid
CC       with a T=3 symmetry, about 32-35 nm in diameter, and consisting of 180
CC       capsid proteins. {ECO:0000256|ARBA:ARBA00002495}.
CC   -!- SUBUNIT: Homomultimer. {ECO:0000256|ARBA:ARBA00011553}.
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AJ607402; CAE55158.1; -; Genomic_RNA.
DR   RefSeq; NP_945116.1; NC_005285.1.
DR   GeneID; 2658902; -.
DR   KEGG; vg:2658902; -.
DR   OrthoDB; 10131at10239; -.
DR   Proteomes; UP000202589; Genome.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR   PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:CAE55158.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          73..263
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
SQ   SEQUENCE   378 AA;  40623 MW;  E6ABCB73E809B57B CRC64;
     MALVRRNNNS NMVAVPAARA TGAAIGSMMF SPTGAKLFWT GMDWVLDKTW QKIKNQFKSR
     KTDMILHPGA YPGAIAAPVA VTRVIRGSKP KFTRSKGAVT ITHRELVGQY NNSAGLVVNG
     SVGGTIYKLN PSNALLFPWL QSIASNFDQY KFDNVKLTYI PMCATTETGR VALYFDKDSQ
     DPVPADRMEL ANMFHLRETA PWAESNLNVP TDNVKRFTND NTTTDLKLVD LGQIGIATFG
     GSGTNPVGDL FIHYTVTFFE PQPSAGIVET EQTGAGALDS GPDMVSVGGD AISTLIVFKT
     PGTFILTLDS VIPPWGLLVP TGVTVNSSTH AQATGFCQSI VNLTVSTPGG ILQYNGTGFG
     NRTVNIVRAK VTNRVDII
//
DBGET integrated database retrieval system