ID Q7DK67_PSESX Unreviewed; 172 AA.
AC Q7DK67;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 03-MAY-2023, entry version 54.
DE SubName: Full=Principle sigma factor {ECO:0000313|EMBL:BAA81975.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:BAA81975.1};
OS Pseudomonas syringae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=317 {ECO:0000313|EMBL:BAA81975.1};
RN [1] {ECO:0000313|EMBL:BAA81975.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=8979356;
RA Sawada H., Takeuchi T., Matsuda I.;
RT "Comparative analysis of Pseudomonas syringae pv. actinidiae and pv.
RT phaseolicola based on phaseolotoxin-resistant ornithine
RT carbamoyltransferase gene (argK) and 16S-23S rRNA intergenic spacer
RT sequences.";
RL Appl. Environ. Microbiol. 63:282-288(1997).
RN [2] {ECO:0000313|EMBL:BAA81975.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=10552044; DOI=.1007/PL00006584;
RA Sawada H., Suzuki F., Matsuda I., Saitou N.;
RT "Phylogenetic analysis of Pseudomonas syringae pathovars suggests the
RT horizontal gene transfer of argK and the evolutionary stability of hrp gene
RT cluster.";
RL J. Mol. Evol. 49:627-644(1999).
RN [3] {ECO:0000313|EMBL:BAA81975.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=11956683; DOI=.1007/s00239-001-0032-y;
RA Sawada H., Kanaya S., Tsuda M., Suzuki F., Azegami K., Saitou N.;
RT "A phylogenomic study of the OCTase genes in Pseudomonas syringae
RT pathovars: the horizontal transfer of the argK-tox cluster and the
RT evolutionary history of OCTase genes on their genomes.";
RL J. Mol. Evol. 54:437-457(2002).
RN [4] {ECO:0000313|EMBL:BAA81975.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=16927007; DOI=.1007/s00239-005-0271-4;
RA Genka H., Baba T., Tsuda M., Kanaya S., Mori H., Yoshida T., Noguchi M.T.,
RA Tsuchiya K., Sawada H.;
RT "Comparative analysis of argK-tox clusters and their flanking regions in
RT phaseolotoxin-producing Pseudomonas syringae pathovars.";
RL J. Mol. Evol. 63:401-414(2006).
RN [5] {ECO:0000313|EMBL:BAA81975.1}
RP NUCLEOTIDE SEQUENCE.
RA Sawada H., Fujikawa T.;
RT "Genetic diversity of Pseudomonas syringae pv. actinidiae, pathogen of
RT kiwifruit bacterial canker.";
RL Plant Pathol. 68:1235-1248(2019).
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DR EMBL; AB016360; BAA81975.1; -; Genomic_DNA.
DR AlphaFoldDB; Q7DK67; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 11..172
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 36..96
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 67..86
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:BAA81975.1"
FT NON_TER 172
FT /evidence="ECO:0000313|EMBL:BAA81975.1"
SQ SEQUENCE 172 AA; 18850 MW; 0A0A58A2785E1762 CRC64;
IREVMGAIAH FPGTVDHILS EYTRVTSEGG RLSDVLSGYI DPDDGIAPPA EVPPPVDPKA
VKAEGADDDE EESADSSDEE DEVESGPDPV IAQQRFGAVS DQMEITRKAL KKFGRDDKHA
IAELVALAEL FMPIKLVPKQ FEGLVERVRG ALERLRAQER AIMQLCVRDA RM
//
