ID Q7DKC4_RHIRD Unreviewed; 253 AA.
AC Q7DKC4;
DT 05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 1.
DT 27-MAR-2024, entry version 130.
DE SubName: Full=Response regulator {ECO:0000313|EMBL:QCL98611.1, ECO:0000313|EMBL:QDY97901.1};
DE SubName: Full=Tiorf152 protein {ECO:0000313|EMBL:BAA87777.1};
GN Name=tiorf152 {ECO:0000313|EMBL:BAA87777.1};
GN Synonyms=virG {ECO:0000313|EMBL:QDY97901.1};
GN ORFNames=CFBP7129_31060 {ECO:0000313|EMBL:QCL98611.1}, CG010_027555
GN {ECO:0000313|EMBL:QDY97901.1};
OS Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium
OS radiobacter).
OG Plasmid pTi {ECO:0000313|EMBL:QDY97901.1},
OG Plasmid pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1},
OG Plasmid pTiCFBP7129 {ECO:0000313|EMBL:QCL98611.1},
OG Plasmid pti {ECO:0000313|Proteomes:UP000222296}, and
OG Plasmid pticfbp7129 {ECO:0000313|Proteomes:UP000298649}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=358 {ECO:0000313|EMBL:BAA87777.1};
RN [1] {ECO:0000313|EMBL:BAA87777.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MAFF 301001 {ECO:0000313|EMBL:BAA87777.1};
RC PLASMID=pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1};
RX PubMed=9524202; DOI=10.1016/S0167-4781(97)00182-6;
RA Suzuki K., Ohta N., Hattori Y., Uraji M., Katoh A., Yoshida K.;
RT "Novel structural difference between nopaline- and octopine-type trbJ
RT genes: construction of genetic and physical map and sequencing of trb/traI
RT and rep gene clusters of a new Ti plasmid pTi-SAKURA.";
RL Biochim. Biophys. Acta 1396:1-7(1998).
RN [2] {ECO:0000313|EMBL:BAA87777.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MAFF 301001 {ECO:0000313|EMBL:BAA87777.1};
RC PLASMID=pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1};
RA Hattori Y., Suzuki K., Ohta N., Uraji M., Katoh A., Yoshida K.;
RT "Genome structure of pTi-SAKURA(I): Strategy for DNA sequencing of a
RT Japanese cherry-Ti plasmid.";
RL Nucleic Acids Symp. Ser. 37:159-160(1998).
RN [3] {ECO:0000313|EMBL:BAA87777.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MAFF 301001 {ECO:0000313|EMBL:BAA87777.1};
RC PLASMID=pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1};
RA Ohta N., Suzuki K., Hattori Y., Uraji M., Katoh A., Yoshida K.;
RT "Genome structure of pTi-SAKURA (III): Characteristics of T-DNA.";
RL Nucleic Acids Symp. Ser. 39:185-186(1998).
RN [4] {ECO:0000313|EMBL:BAA87777.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MAFF 301001 {ECO:0000313|EMBL:BAA87777.1};
RC PLASMID=pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1};
RA Uraji M., Suzuki K., Ohta N., Hattori Y., Katoh A., Yoshida K.;
RT "Genome structure of pTi-SAKURA (IV): Characteristics of tra region.";
RL Nucleic Acids Symp. Ser. 39:187-188(1998).
RN [5] {ECO:0000313|EMBL:BAA87777.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MAFF 301001 {ECO:0000313|EMBL:BAA87777.1};
RC PLASMID=pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1};
RA Hattori Y., Suzuki K., Ohta N., Uraji M., Katoh A., Yoshida K.;
RT "Genome structure of pTi-SAKURA (V): Complete nucleotide sequence of
RT plasmid pTi-SAKURA's vir region in Agrobacterium tumefaciens.";
RL Nucleic Acids Symp. Ser. 39:265-266(1998).
RN [6] {ECO:0000313|EMBL:BAA87777.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=MAFF 301001 {ECO:0000313|EMBL:BAA87777.1};
RC PLASMID=pTi-SAKURA {ECO:0000313|EMBL:BAA87777.1};
RX PubMed=10721727; DOI=10.1016/S0378-1119(99)00502-8;
RA Suzuki K., Hattori Y., Uraji M., Ohta N., Iwata K., Murata K., Katoh A.,
RA Yoshida K.;
RT "Complete nucleotide sequence of a plant tumor-inducing Ti plasmid.";
RL Gene 242:331-336(2000).
RN [7] {ECO:0000313|EMBL:QDY97901.1, ECO:0000313|Proteomes:UP000222296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=186 {ECO:0000313|EMBL:QDY97901.1,
RC ECO:0000313|Proteomes:UP000222296};
RC PLASMID=pTi {ECO:0000313|EMBL:QDY97901.1}, and pti
RC {ECO:0000313|Proteomes:UP000222296};
RX PubMed=29146852;
RA Poret-Peterson A.T., Bhatnagar S., McClean A.E., Kluepfel D.A.;
RT "Draft Genome Sequence of Agrobacterium tumefaciens Biovar 1 Strain 186,
RT Isolated from Walnut.";
RL Genome Announc. 5:e01232-17(2017).
RN [8] {ECO:0000313|EMBL:QCL98611.1, ECO:0000313|Proteomes:UP000298649}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFBP7129 {ECO:0000313|EMBL:QCL98611.1,
RC ECO:0000313|Proteomes:UP000298649};
RC PLASMID=pticfbp7129 {ECO:0000313|Proteomes:UP000298649}, and
RC pTiCFBP7129 {ECO:0000313|EMBL:QCL98611.1};
RA Haryono M., Lin Y.-C., Lai E.-M., Kuo C.-H.;
RT "Complete genome sequence of Agrobacterium tumefaciens CFBP7129.";
RL Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
RN [9] {ECO:0000313|EMBL:QDY97901.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=186 {ECO:0000313|EMBL:QDY97901.1};
RC PLASMID=pTi {ECO:0000313|EMBL:QDY97901.1};
RA Poret-Peterson A.T., Bhatnagar S., Chen L., McClean A.E., Kluepfel D.A.;
RL Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AB016260; BAA87777.1; -; Genomic_DNA.
DR EMBL; CP039927; QCL98611.1; -; Genomic_DNA.
DR EMBL; CP042277; QDY97901.1; -; Genomic_DNA.
DR RefSeq; NP_053392.1; NC_002147.1.
DR RefSeq; WP_010891492.1; NZ_QSNR01000013.1.
DR SMR; Q7DKC4; -.
DR GeneID; 39477123; -.
DR Proteomes; UP000222296; Plasmid pti.
DR Proteomes; UP000298649; Plasmid pticfbp7129.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd17594; REC_OmpR_VirG; 1.
DR CDD; cd00383; trans_reg_C; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 6.10.250.690; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR001867; OmpR/PhoB-type_DNA-bd.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR InterPro; IPR039420; WalR-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR48111:SF4; DNA-BINDING DUAL TRANSCRIPTIONAL REGULATOR OMPR; 1.
DR PANTHER; PTHR48111; REGULATOR OF RPOS; 1.
DR Pfam; PF00072; Response_reg; 1.
DR Pfam; PF00486; Trans_reg_C; 1.
DR SMART; SM00448; REC; 1.
DR SMART; SM00862; Trans_reg_C; 1.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR PROSITE; PS51755; OMPR_PHOB; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU01091}; Phosphoprotein {ECO:0000256|PROSITE-ProRule:PRU00169};
KW Plasmid {ECO:0000313|EMBL:BAA87777.1}.
FT DOMAIN 15..129
FT /note="Response regulatory"
FT /evidence="ECO:0000259|PROSITE:PS50110"
FT DOMAIN 141..241
FT /note="OmpR/PhoB-type"
FT /evidence="ECO:0000259|PROSITE:PS51755"
FT DNA_BIND 141..241
FT /note="OmpR/PhoB-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01091"
FT MOD_RES 64
FT /note="4-aspartylphosphate"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00169"
SQ SEQUENCE 253 AA; 28416 MW; 2BCFF0DDEC7217C4 CRC64;
MAGQDPRLRG EPLKHVLVID DDVAMRHLIV EYLTIHAFKV TAVADSKQFN RVLCSETVDV
VVVDLNLGRE DGLEIVRSLA TKSDVPIIII SGARLEEADK VIALELGATD FIAKPFGTRE
FLARIRVALR VRPSVARTKD RRSFSFADWT LNLRRRRLIS EEGSEVKLTA GEFNLLVAFL
EKPRDVLSRE QLLIASRVRE EEVYDRSIDV LILRLRRKLE GDPTTPQLIK TARGAGYFFD
ADVDVSYGGV MAA
//
