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Database: UniProt
Entry: Q7MY01_PHOLL
LinkDB: Q7MY01_PHOLL
Original site: Q7MY01_PHOLL 
ID   Q7MY01_PHOLL            Unreviewed;       619 AA.
AC   Q7MY01;
DT   15-DEC-2003, integrated into UniProtKB/TrEMBL.
DT   15-DEC-2003, sequence version 1.
DT   24-JAN-2024, entry version 124.
DE   RecName: Full=Selenocysteine-specific elongation factor {ECO:0000256|ARBA:ARBA00015953};
DE   AltName: Full=SelB translation factor {ECO:0000256|ARBA:ARBA00031615};
GN   Name=selB {ECO:0000313|EMBL:CAE17270.1};
GN   OrderedLocusNames=plu4898 {ECO:0000313|EMBL:CAE17270.1};
OS   Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 /
OS   TT01) (Photorhabdus luminescens subsp. laumondii).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC   Morganellaceae; Photorhabdus.
OX   NCBI_TaxID=243265 {ECO:0000313|EMBL:CAE17270.1, ECO:0000313|Proteomes:UP000002514};
RN   [1] {ECO:0000313|Proteomes:UP000002514}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 15139 / CIP 105565 / TT01
RC   {ECO:0000313|Proteomes:UP000002514};
RX   PubMed=14528314; DOI=10.1038/nbt886;
RA   Duchaud E., Rusniok C., Frangeul L., Buchrieser C., Givaudan A.,
RA   Taourit S., Bocs S., Boursaux-Eude C., Chandler M., Charles J.-F.,
RA   Dassa E., Derose R., Derzelle S., Freyssinet G., Gaudriault S., Medigue C.,
RA   Lanois A., Powell K., Siguier P., Vincent R., Wingate V., Zouine M.,
RA   Glaser P., Boemare N., Danchin A., Kunst F.;
RT   "The genome sequence of the entomopathogenic bacterium Photorhabdus
RT   luminescens.";
RL   Nat. Biotechnol. 21:1307-1313(2003).
CC   -!- FUNCTION: Translation factor necessary for the incorporation of
CC       selenocysteine into proteins. It probably replaces EF-Tu for the
CC       insertion of selenocysteine directed by the UGA codon. SelB binds GTP
CC       and GDP. {ECO:0000256|ARBA:ARBA00025526}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
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DR   EMBL; BX571875; CAE17270.1; -; Genomic_DNA.
DR   RefSeq; WP_011148951.1; NC_005126.1.
DR   AlphaFoldDB; Q7MY01; -.
DR   STRING; 243265.plu4898; -.
DR   GeneID; 24169592; -.
DR   KEGG; plu:plu4898; -.
DR   eggNOG; COG3276; Bacteria.
DR   HOGENOM; CLU_023030_3_0_6; -.
DR   OMA; NDHILRD; -.
DR   OrthoDB; 9803139at2; -.
DR   Proteomes; UP000002514; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:InterPro.
DR   GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003924; F:GTPase activity; IEA:InterPro.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0001514; P:selenocysteine incorporation; IEA:InterPro.
DR   CDD; cd04171; SelB; 1.
DR   CDD; cd03696; SelB_II; 1.
DR   CDD; cd15491; selB_III; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 2.40.30.10; Translation factors; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR   InterPro; IPR004161; EFTu-like_2.
DR   InterPro; IPR015190; Elong_fac_SelB-wing-hlx_typ-2.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR048931; SelB_WH_3rd.
DR   InterPro; IPR015191; SelB_WHD4.
DR   InterPro; IPR048649; SelB_WND1.
DR   InterPro; IPR000795; T_Tr_GTP-bd_dom.
DR   InterPro; IPR009000; Transl_B-barrel_sf.
DR   InterPro; IPR009001; Transl_elong_EF1A/Init_IF2_C.
DR   InterPro; IPR004535; Transl_elong_SelB.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   NCBIfam; TIGR00475; selB; 1.
DR   PANTHER; PTHR43721:SF22; ELONGATION FACTOR TU, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR43721; ELONGATION FACTOR TU-RELATED; 1.
DR   Pfam; PF21214; bact_SelB_WH_2nd; 1.
DR   Pfam; PF00009; GTP_EFTU; 1.
DR   Pfam; PF03144; GTP_EFTU_D2; 1.
DR   Pfam; PF21458; SelB-wing_1_3; 1.
DR   Pfam; PF09106; SelB-wing_2; 1.
DR   Pfam; PF09107; SelB-wing_3; 1.
DR   PRINTS; PR00315; ELONGATNFCT.
DR   SUPFAM; SSF50465; EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF50447; Translation proteins; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 3.
DR   PROSITE; PS51722; G_TR_2; 1.
PE   4: Predicted;
KW   Elongation factor {ECO:0000313|EMBL:CAE17270.1};
KW   GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Protein biosynthesis {ECO:0000313|EMBL:CAE17270.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002514}.
FT   DOMAIN          1..169
FT                   /note="Tr-type G"
FT                   /evidence="ECO:0000259|PROSITE:PS51722"
SQ   SEQUENCE   619 AA;  69586 MW;  676C2528BB87B6A8 CRC64;
     MIFATAGHVD HGKTTLIQAI TGVNTAHLPE EKKRGMTIDL GYAYWPQPDG SSVGFIDVPG
     HEKFLANMLA GIGGIDHVLL VVACDDGVMA QTREHLAILR LIGRPAMTVA LTKADRVETQ
     RIVEVRQQIE HELATQGWSE SPLFVTAAAD KESIVPLRQH LLQLHQQNKQ HKKLHQRFRL
     AIDRAFSVKG AGLVVTGTAL AGRVRVGDTL WLTGRDQQIR VRGLHAQNQQ ADTAQAGQRI
     ALNIAGDVSK EQVSRGDWLL SRQPFEHVEK VLVEVETDEP LRNWQSLHIH HAASHITGRI
     SLLNPLSDKP LLAELVLDSP LWLVEDDRLI LRDISARKTL AGTRVINLNS PRRGKRQPAF
     LHWLTQLART SDHAANLALH LPRGALSLDH FSWARQLTEA TLHPLIVDQD MIIADGMVLS
     QNNAKLAKQK LLHVLAEYHQ QHVDQLGLGR ARLKRMALPT LDEALVYTLI DALLSDGQLK
     QLRGWLYLPE HGLSFSDEQA KLWQRIAPYF TDDPWWVRDL TADLKEEEAT VRSLLKKAAQ
     LGHIIAIVPD RYYCSQRIQQ FADLIRQFNQ DHGAITAADF RDQLGIGRKL AIQILEFFDR
     SGFTRRQAES HILRDNGLF
//
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