ID Q7X7X3_ORYSJ Unreviewed; 1342 AA.
AC Q7X7X3;
DT 01-OCT-2003, integrated into UniProtKB/TrEMBL.
DT 05-JUL-2004, sequence version 2.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=OSJNBb0112E13.7 protein {ECO:0000313|EMBL:CAE02325.2};
GN Name=OSJNBb0112E13.7 {ECO:0000313|EMBL:CAE02325.2};
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947 {ECO:0000313|EMBL:CAE02325.2};
RN [1] {ECO:0000313|EMBL:CAE02325.2}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=12447439; DOI=10.1038/nature01183;
RA Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y.,
RA Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q.,
RA Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T.,
RA Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R.,
RA Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G.,
RA Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C.,
RA Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J.,
RA Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J.,
RA Li J., Hong G., Xue Y., Han B.;
RT "Sequence and analysis of rice chromosome 4.";
RL Nature 420:316-320(2002).
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DR EMBL; AL731631; CAE02325.2; -; Genomic_DNA.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09272; RNase_HI_RT_Ty1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR025724; GAG-pre-integrase_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR013103; RVT_2.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR42648:SF22; RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON TNT 1-94; 1.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR Pfam; PF13976; gag_pre-integrs; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF07727; RVT_2; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 242..257
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 485..650
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 188..239
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 729..774
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..239
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 729..751
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 752..774
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1342 AA; 150780 MW; AF6878B7686349AF CRC64;
MAGFADALRP DKFTGVHFKR WQIRVTLWLT AMKCFRVSTG KPEGVLTAEQ QKQFEEATTL
FVGCILSVLG DRLVEVYMHM TDAKELWDAL NTKFGATDAS NDLYIMEQFH DYKMADNRSV
VEQAHEIQTM AKELELLKCV LPDKFVAGCI IAKLPPSWRS FGTALKHKRQ EYSVEGLIAS
LDVEEKAREK DAASKSDGGQ SSANVVHKAQ NKSKGKYKAQ QTTNFKKQKK NNNNPNQDER
TCFVCGQVGH LARKCPQRKG MKAPAGQTSK SANVTIGNTG DGSGYGNLPT VFSVNQSTNW
WVDTGANVHV CADISLFSSY QVARGSTVLM GNGSHASVHG LGTVDLKFTS GKIVQLKNVQ
HVPSIDRNLV SGSRLTRDGF KLVFESNKVV VSKHGYFIGK GYECGGLFRF SLSDFCNKSV
NHICGSVDDE ANVWYSRLCH INFGLMSRLS SMCLIPKFSI VKGSKCHSCV QSKQPRKPHK
AAEKRNLAPL ELLHSDLYEM NGVLTKGGKR YFMTLIDDAT TFCYVYLLKM KDEALDYFKI
YKAEVENQLD RKIKRLRSDR GGEFFSNEFD LFCEEHGIIH ERTPPYSPES NGIAERKNRT
LTDLVNAMLD TAGLPKAWWG EALLTSNHVL NRVPNRNKDK TPYEIWIGRK PSLSYLRTWG
CLAKVNVPIT KKRKLGPKTV DCVFLGYAHH SIAYRFLIVK SEVLDMHVGT IMESRDATFF
ESFFPMKDTH SGSNQPSEII PSSITPPEQT EHTHELVSEE DVSEAPRRSK RQRTAKSFGD
DFTVYLVDDT PKSISEAYAS PDADYWKEAV RSEMDSIIAN GIWEVTERPY GCKPVGCKWV
FKKKLRPDGT IEKYKARLVA KGYTQKEGED FFDTYSPIAR LTTIRVLLSL AASHGLLVHQ
MDVKTAFLNG ELDEEIYMDQ PDGFVVEGQE GKVCKLLKSL YGLKQAPKQW HEKFDKTLTS
AGFAVNEADK CVYYRHGGGK GVILCLYVDD ILIFGTNLEV INEVKSFLSQ NFDMKDLGVA
DVILNIKLIR GENGITLLQS HYVEKILNRF GYIDSKPSPT PYDPSLLLRK NNRIARNQLE
YSQIIGSLMY LASATRPDIS FAVSKLSRFT SNPGDDHWRA LERIMRYLKG TVELGLHYTG
YPAVLEGYSD SNWISDVDEI KATSGYVFTL GGGAVSWRSC KQTILTRSTM EAELTALDTA
TVEAEWLRDL LMDLPVVEKP VPAILMNCDN QTVIVKVNSS KDNMKSSRHV KRRLKSVRKL
RNSGVITLDY IQTARNLADP FTKGLSRNVI DNASKEMGLR PIEDVVLQSI LERTHLCELD
CWSQSMKILG ESSRKLTKDL GV
//
